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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.90280Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 340 / 3316537 515 / 2498449 1050 / 114162531 2858 / 109592465 340 / 3316537 515 / 2498449 1050 / 114162531 2858 / 109592465
adrenal cortex -- 3 / 9928 -- -- -- 3 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   8 / 57865 --   0 / 16077 8 / 57865 -- 0 / 83577
bone marrow 1 / 14774 14 / 29891 45 / 5047110 27 / 4978364 1 / 14774 14 / 29891 45 / 5047110 27 / 4978364
brain 67 / 506301 53 / 200215 5 / 729526 56 / 4997811 67 / 506301 53 / 200215 5 / 729526 56 / 4997811
cartilage 4 / 15965 6 / 37226 -- 10 / 778035 4 / 15965 6 / 37226 -- 10 / 778035
cerebellum 11 / 90353   1 / 90885 14 / 1495938 11 / 90353 0 / 0 1 / 90885 14 / 1495938
cerebrum 12 / 198932 1 / 3422 -- -- 12 / 198932 1 / 3422 -- --
cervix 1 / 3888 9 / 44577 -- -- 1 / 3888 9 / 44577 -- --
colon 2 / 26551 53 / 151167   19 / 643586 2 / 26551 53 / 151167 0 / 98089 19 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 36 / 246043   -- -- 36 / 246043 0 / 38 -- --
endocrine 4 / 19564   -- -- 4 / 19564 0 / 2857 -- --
esophagus   3 / 17290 -- -- 0 / 270 3 / 17290 -- --
eye 10 / 128826 22 / 46440 2 / 85898 186 / 12434232 10 / 128826 22 / 46440 2 / 85898 186 / 12434232
gastrointestinal tract 6 / 28803 2 / 12721   -- 6 / 28803 2 / 12721 0 / 45908 --
heart 12 / 76442     -- 12 / 76442 0 / 1 0 / 83063 --
kidney 8 / 106627 10 / 89898 3 / 155372 2 / 100281 8 / 106627 10 / 89898 3 / 155372 2 / 100281
limb -- -- -- -- -- -- -- --
liver 7 / 96846 21 / 107249   1 / 214987 7 / 96846 21 / 107249 0 / 66308 1 / 214987
lung 7 / 128150 17 / 170663 2 / 159917 1 / 159059 7 / 128150 17 / 170663 2 / 159917 1 / 159059
lymph node 3 / 62650 10 / 27007 29 / 5278419 32 / 4863489 3 / 62650 10 / 27007 29 / 5278419 32 / 4863489
lymphoreticular 5 / 17836 29 / 44303 -- -- 5 / 17836 29 / 44303 -- --
mammary gland 3 / 46553 16 / 104307 104 / 43166038 852 / 30312656 3 / 46553 16 / 104307 104 / 43166038 852 / 30312656
muscle   8 / 27691 2 / 107836 1 / 61270 0 / 74039 8 / 27691 2 / 107836 1 / 61270
nervous 3 / 10333   -- -- 3 / 10333 0 / 8 -- --
ovary   15 / 89988 5 / 94887 7 / 179472 0 / 11462 15 / 89988 5 / 94887 7 / 179472
pancreas   14 / 74930 1 / 85728 6 / 189999 0 / 7237 14 / 74930 1 / 85728 6 / 189999
pancreatic islet 6 / 96524   -- -- 6 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 3 / 14891   -- -- 3 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 3 / 13260   -- -- 3 / 13260 0 / 1358 -- --
placenta 21 / 241088 9 / 39531   -- 21 / 241088 9 / 39531 0 / 207348 --
pooled tissue 38 / 276455   -- -- 38 / 276455 0 / 0 -- --
prostate 2 / 79993 25 / 107080 5 / 266949 24 / 491794 2 / 79993 25 / 107080 5 / 266949 24 / 491794
retina   -- 6 / 820326   0 / 29438 -- 6 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 4 / 73633 41 / 125377 161 / 26905847 391 / 34522313 4 / 73633 41 / 125377 161 / 26905847 391 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 8 / 52939   -- -- 8 / 52939 0 / 5 -- --
stem cell -- -- 420 / 6230144 -- -- -- 420 / 6230144 --
stomach 1 / 26641 9 / 65644   14 / 448716 1 / 26641 9 / 65644 0 / 124767 14 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 11 / 143630 32 / 100058 -- 1212 / 12372003 11 / 143630 32 / 100058 -- 1212 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 2 / 11737 1 / 32606 1 / 115938 1 / 124664 2 / 11737 1 / 32606 1 / 115938 1 / 124664
uncharacterized tissue 27 / 207932 66 / 479819 1 / 21833 2 / 51729 27 / 207932 66 / 479819 1 / 21833 2 / 51729
uterus 3 / 38063 18 / 133582 70 / 10193077 -- 3 / 38063 18 / 133582 70 / 10193077 --
vascular 5 / 46250 -- 183 / 13135050 -- 5 / 46250 -- 183 / 13135050 --
white blood cells -- -- 4 / 846268 -- -- -- 4 / 846268 --
whole body -- -- -- -- -- -- -- --