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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.89497Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 73 / 3316537 129 / 2498449 958 / 114162531 2522 / 109592465 73 / 3316537 129 / 2498449 958 / 114162531 2522 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   1 / 57865 --   0 / 16077 1 / 57865 -- 0 / 83577
bone marrow   6 / 29891 15 / 5047110   0 / 14774 6 / 29891 15 / 5047110 0 / 4978364
brain 14 / 506301 2 / 200215 19 / 729526 125 / 4997811 14 / 506301 2 / 200215 19 / 729526 125 / 4997811
cartilage   1 / 37226 -- 6 / 778035 0 / 15965 1 / 37226 -- 6 / 778035
cerebellum 1 / 90353   1 / 90885 102 / 1495938 1 / 90353 0 / 0 1 / 90885 102 / 1495938
cerebrum     -- -- 0 / 198932 0 / 3422 -- --
cervix   1 / 44577 -- -- 0 / 3888 1 / 44577 -- --
colon   13 / 151167 2 / 98089 46 / 643586 0 / 26551 13 / 151167 2 / 98089 46 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 20 / 246043   -- -- 20 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 1 / 128826 5 / 46440 6 / 85898 624 / 12434232 1 / 128826 5 / 46440 6 / 85898 624 / 12434232
gastrointestinal tract 1 / 28803     -- 1 / 28803 0 / 12721 0 / 45908 --
heart 4 / 76442     -- 4 / 76442 0 / 1 0 / 83063 --
kidney 2 / 106627 2 / 89898 4 / 155372 1 / 100281 2 / 106627 2 / 89898 4 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver   3 / 107249   2 / 214987 0 / 96846 3 / 107249 0 / 66308 2 / 214987
lung 1 / 128150 3 / 170663 6 / 159917 1 / 159059 1 / 128150 3 / 170663 6 / 159917 1 / 159059
lymph node 7 / 62650 1 / 27007 98 / 5278419 28 / 4863489 7 / 62650 1 / 27007 98 / 5278419 28 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland   10 / 104307 91 / 43166038 509 / 30312656 0 / 46553 10 / 104307 91 / 43166038 509 / 30312656
muscle 3 / 74039     4 / 61270 3 / 74039 0 / 27691 0 / 107836 4 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   3 / 89988 5 / 94887 5 / 179472 0 / 11462 3 / 89988 5 / 94887 5 / 179472
pancreas   1 / 74930 2 / 85728 3 / 189999 0 / 7237 1 / 74930 2 / 85728 3 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta   6 / 39531 4 / 207348 -- 0 / 241088 6 / 39531 4 / 207348 --
pooled tissue 7 / 276455   -- -- 7 / 276455 0 / 0 -- --
prostate   5 / 107080 3 / 266949 10 / 491794 0 / 79993 5 / 107080 3 / 266949 10 / 491794
retina   -- 13 / 820326 11 / 88490 0 / 29438 -- 13 / 820326 11 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 2 / 73633 4 / 125377 54 / 26905847 174 / 34522313 2 / 73633 4 / 125377 54 / 26905847 174 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 4 / 52939   -- -- 4 / 52939 0 / 5 -- --
stem cell -- -- 311 / 6230144 -- -- -- 311 / 6230144 --
stomach   4 / 65644 3 / 124767 13 / 448716 0 / 26641 4 / 65644 3 / 124767 13 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 2 / 143630 6 / 100058 -- 856 / 12372003 2 / 143630 6 / 100058 -- 856 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606 1 / 115938   0 / 11737 1 / 32606 1 / 115938 0 / 124664
uncharacterized tissue 4 / 207932 40 / 479819 2 / 21833 2 / 51729 4 / 207932 40 / 479819 2 / 21833 2 / 51729
uterus   8 / 133582 35 / 10193077 -- 0 / 38063 8 / 133582 35 / 10193077 --
vascular   -- 251 / 13135050 -- 0 / 46250 -- 251 / 13135050 --
white blood cells -- -- 32 / 846268 -- -- -- 32 / 846268 --
whole body -- -- -- -- -- -- -- --