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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.78582Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 246 / 3316537 178 / 2498449 1200 / 114162531 1066 / 109592465 246 / 3316537 178 / 2498449 1200 / 114162531 1066 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone     -- 6 / 83577 0 / 16077 0 / 57865 -- 6 / 83577
bone marrow   1 / 29891 4 / 5047110 27 / 4978364 0 / 14774 1 / 29891 4 / 5047110 27 / 4978364
brain 39 / 506301 29 / 200215 14 / 729526 104 / 4997811 39 / 506301 29 / 200215 14 / 729526 104 / 4997811
cartilage 1 / 15965 4 / 37226 -- 22 / 778035 1 / 15965 4 / 37226 -- 22 / 778035
cerebellum 16 / 90353   3 / 90885 10 / 1495938 16 / 90353 0 / 0 3 / 90885 10 / 1495938
cerebrum 10 / 198932   -- -- 10 / 198932 0 / 3422 -- --
cervix   14 / 44577 -- -- 0 / 3888 14 / 44577 -- --
colon 3 / 26551 5 / 151167 1 / 98089 24 / 643586 3 / 26551 5 / 151167 1 / 98089 24 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 17 / 246043   -- -- 17 / 246043 0 / 38 -- --
endocrine 7 / 19564   -- -- 7 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 10 / 128826 1 / 46440 2 / 85898 55 / 12434232 10 / 128826 1 / 46440 2 / 85898 55 / 12434232
gastrointestinal tract 2 / 28803 2 / 12721   -- 2 / 28803 2 / 12721 0 / 45908 --
heart 4 / 76442     -- 4 / 76442 0 / 1 0 / 83063 --
kidney 13 / 106627 8 / 89898 6 / 155372   13 / 106627 8 / 89898 6 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 8 / 107249   1 / 214987 1 / 96846 8 / 107249 0 / 66308 1 / 214987
lung 10 / 128150 8 / 170663 2 / 159917 4 / 159059 10 / 128150 8 / 170663 2 / 159917 4 / 159059
lymph node 4 / 62650   46 / 5278419 7 / 4863489 4 / 62650 0 / 27007 46 / 5278419 7 / 4863489
lymphoreticular 1 / 17836 3 / 44303 -- -- 1 / 17836 3 / 44303 -- --
mammary gland 8 / 46553 6 / 104307 428 / 43166038 267 / 30312656 8 / 46553 6 / 104307 428 / 43166038 267 / 30312656
muscle 7 / 74039 7 / 27691 3 / 107836   7 / 74039 7 / 27691 3 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 5 / 89988 4 / 94887 2 / 179472 1 / 11462 5 / 89988 4 / 94887 2 / 179472
pancreas   6 / 74930 1 / 85728 6 / 189999 0 / 7237 6 / 74930 1 / 85728 6 / 189999
pancreatic islet 6 / 96524   -- -- 6 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system 2 / 14891   -- -- 2 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 20 / 241088 1 / 39531 2 / 207348 -- 20 / 241088 1 / 39531 2 / 207348 --
pooled tissue 18 / 276455   -- -- 18 / 276455 0 / 0 -- --
prostate 6 / 79993 3 / 107080 4 / 266949 15 / 491794 6 / 79993 3 / 107080 4 / 266949 15 / 491794
retina 1 / 29438 -- 6 / 820326   1 / 29438 -- 6 / 820326 0 / 88490
salivary gland 1 / 2490   -- -- 1 / 2490 0 / 10368 -- --
skin 4 / 73633 4 / 125377 219 / 26905847 283 / 34522313 4 / 73633 4 / 125377 219 / 26905847 283 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 7 / 52939   -- -- 7 / 52939 0 / 5 -- --
stem cell -- -- 87 / 6230144 -- -- -- 87 / 6230144 --
stomach   4 / 65644 2 / 124767 4 / 448716 0 / 26641 4 / 65644 2 / 124767 4 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 8 / 143630   -- 227 / 12372003 8 / 143630 0 / 100058 -- 227 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 2 / 11737 3 / 32606     2 / 11737 3 / 32606 0 / 115938 0 / 124664
uncharacterized tissue 13 / 207932 51 / 479819   2 / 51729 13 / 207932 51 / 479819 0 / 21833 2 / 51729
uterus 2 / 38063 3 / 133582 173 / 10193077 -- 2 / 38063 3 / 133582 173 / 10193077 --
vascular 2 / 46250 -- 183 / 13135050 -- 2 / 46250 -- 183 / 13135050 --
white blood cells -- -- 10 / 846268 -- -- -- 10 / 846268 --
whole body -- -- -- -- -- -- -- --