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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.76394Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 296 / 3316537 441 / 2498449 2433 / 114162531 3586 / 109592465 296 / 3316537 441 / 2498449 2433 / 114162531 3586 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 3 / 16077 6 / 57865 -- 7 / 83577 3 / 16077 6 / 57865 -- 7 / 83577
bone marrow   1 / 29891 98 / 5047110 194 / 4978364 0 / 14774 1 / 29891 98 / 5047110 194 / 4978364
brain 26 / 506301 38 / 200215 100 / 729526 348 / 4997811 26 / 506301 38 / 200215 100 / 729526 348 / 4997811
cartilage   2 / 37226 -- 56 / 778035 0 / 15965 2 / 37226 -- 56 / 778035
cerebellum     6 / 90885 76 / 1495938 0 / 90353 0 / 0 6 / 90885 76 / 1495938
cerebrum 8 / 198932   -- -- 8 / 198932 0 / 3422 -- --
cervix   6 / 44577 -- -- 0 / 3888 6 / 44577 -- --
colon 5 / 26551 42 / 151167 4 / 98089 61 / 643586 5 / 26551 42 / 151167 4 / 98089 61 / 643586
ear 2 / 16130 -- -- -- 2 / 16130 -- -- --
embryonic tissue 44 / 246043   -- -- 44 / 246043 0 / 38 -- --
endocrine 2 / 19564   -- -- 2 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 20 / 128826 5 / 46440 14 / 85898 227 / 12434232 20 / 128826 5 / 46440 14 / 85898 227 / 12434232
gastrointestinal tract   1 / 12721 3 / 45908 -- 0 / 28803 1 / 12721 3 / 45908 --
heart 12 / 76442   6 / 83063 -- 12 / 76442 0 / 1 6 / 83063 --
kidney 5 / 106627 16 / 89898 23 / 155372 16 / 100281 5 / 106627 16 / 89898 23 / 155372 16 / 100281
limb -- -- -- -- -- -- -- --
liver 6 / 96846 12 / 107249 17 / 66308 7 / 214987 6 / 96846 12 / 107249 17 / 66308 7 / 214987
lung 9 / 128150 24 / 170663 9 / 159917 9 / 159059 9 / 128150 24 / 170663 9 / 159917 9 / 159059
lymph node 8 / 62650 2 / 27007 87 / 5278419 53 / 4863489 8 / 62650 2 / 27007 87 / 5278419 53 / 4863489
lymphoreticular 7 / 17836 8 / 44303 -- -- 7 / 17836 8 / 44303 -- --
mammary gland 18 / 46553 16 / 104307 349 / 43166038 885 / 30312656 18 / 46553 16 / 104307 349 / 43166038 885 / 30312656
muscle 9 / 74039 2 / 27691 15 / 107836 3 / 61270 9 / 74039 2 / 27691 15 / 107836 3 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 3 / 11462 19 / 89988 8 / 94887 22 / 179472 3 / 11462 19 / 89988 8 / 94887 22 / 179472
pancreas   38 / 74930 10 / 85728 19 / 189999 0 / 7237 38 / 74930 10 / 85728 19 / 189999
pancreatic islet 9 / 96524 12 / 30072 -- -- 9 / 96524 12 / 30072 -- --
parathyroid   3 / 20557 -- -- 0 / 24 3 / 20557 -- --
peripheral nervous system 4 / 14891   -- -- 4 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 2 / 13260   -- -- 2 / 13260 0 / 1358 -- --
placenta 22 / 241088 10 / 39531 12 / 207348 -- 22 / 241088 10 / 39531 12 / 207348 --
pooled tissue 26 / 276455   -- -- 26 / 276455 0 / 0 -- --
prostate 4 / 79993 40 / 107080 36 / 266949 173 / 491794 4 / 79993 40 / 107080 36 / 266949 173 / 491794
retina 3 / 29438 -- 27 / 820326 1 / 88490 3 / 29438 -- 27 / 820326 1 / 88490
salivary gland   10 / 10368 -- -- 0 / 2490 10 / 10368 -- --
skin 6 / 73633 41 / 125377 487 / 26905847 979 / 34522313 6 / 73633 41 / 125377 487 / 26905847 979 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 2 / 52939   -- -- 2 / 52939 0 / 5 -- --
stem cell -- -- 218 / 6230144 -- -- -- 218 / 6230144 --
stomach 3 / 26641 1 / 65644 8 / 124767 29 / 448716 3 / 26641 1 / 65644 8 / 124767 29 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 13 / 143630 5 / 100058 -- 414 / 12372003 13 / 143630 5 / 100058 -- 414 / 12372003
thymus 2 / 4478   -- -- 2 / 4478 0 / 165 -- --
thyroid 1 / 11737 4 / 32606 4 / 115938 5 / 124664 1 / 11737 4 / 32606 4 / 115938 5 / 124664
uncharacterized tissue 7 / 207932 38 / 479819   2 / 51729 7 / 207932 38 / 479819 0 / 21833 2 / 51729
uterus 1 / 38063 38 / 133582 536 / 10193077 -- 1 / 38063 38 / 133582 536 / 10193077 --
vascular 3 / 46250 -- 308 / 13135050 -- 3 / 46250 -- 308 / 13135050 --
white blood cells -- -- 48 / 846268 -- -- -- 48 / 846268 --
whole body -- -- -- -- -- -- -- --