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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.743296Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 312 / 3316537 224 / 2498449 2980 / 114162531 3414 / 109592465 312 / 3316537 224 / 2498449 2980 / 114162531 3414 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   4 / 57865 -- 1 / 83577 0 / 16077 4 / 57865 -- 1 / 83577
bone marrow 1 / 14774 2 / 29891 374 / 5047110 117 / 4978364 1 / 14774 2 / 29891 374 / 5047110 117 / 4978364
brain 45 / 506301 18 / 200215 4 / 729526 67 / 4997811 45 / 506301 18 / 200215 4 / 729526 67 / 4997811
cartilage 2 / 15965 3 / 37226 -- 27 / 778035 2 / 15965 3 / 37226 -- 27 / 778035
cerebellum 10 / 90353   6 / 90885 14 / 1495938 10 / 90353 0 / 0 6 / 90885 14 / 1495938
cerebrum 7 / 198932   -- -- 7 / 198932 0 / 3422 -- --
cervix 1 / 3888 5 / 44577 -- -- 1 / 3888 5 / 44577 -- --
colon 4 / 26551 11 / 151167 3 / 98089 8 / 643586 4 / 26551 11 / 151167 3 / 98089 8 / 643586
ear 4 / 16130 -- -- -- 4 / 16130 -- -- --
embryonic tissue 33 / 246043   -- -- 33 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 13 / 128826 1 / 46440 1 / 85898 849 / 12434232 13 / 128826 1 / 46440 1 / 85898 849 / 12434232
gastrointestinal tract 2 / 28803 2 / 12721 1 / 45908 -- 2 / 28803 2 / 12721 1 / 45908 --
heart 14 / 76442     -- 14 / 76442 0 / 1 0 / 83063 --
kidney 7 / 106627 5 / 89898 2 / 155372   7 / 106627 5 / 89898 2 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 4 / 96846 8 / 107249   5 / 214987 4 / 96846 8 / 107249 0 / 66308 5 / 214987
lung 13 / 128150 11 / 170663 2 / 159917 8 / 159059 13 / 128150 11 / 170663 2 / 159917 8 / 159059
lymph node 7 / 62650   138 / 5278419 17 / 4863489 7 / 62650 0 / 27007 138 / 5278419 17 / 4863489
lymphoreticular 3 / 17836 5 / 44303 -- -- 3 / 17836 5 / 44303 -- --
mammary gland 2 / 46553 12 / 104307 86 / 43166038 832 / 30312656 2 / 46553 12 / 104307 86 / 43166038 832 / 30312656
muscle 4 / 74039 3 / 27691 1 / 107836 5 / 61270 4 / 74039 3 / 27691 1 / 107836 5 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary 1 / 11462 12 / 89988 1 / 94887 6 / 179472 1 / 11462 12 / 89988 1 / 94887 6 / 179472
pancreas   6 / 74930 6 / 85728 5 / 189999 0 / 7237 6 / 74930 6 / 85728 5 / 189999
pancreatic islet 21 / 96524 4 / 30072 -- -- 21 / 96524 4 / 30072 -- --
parathyroid   3 / 20557 -- -- 0 / 24 3 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 3 / 13260   -- -- 3 / 13260 0 / 1358 -- --
placenta 20 / 241088 11 / 39531 1 / 207348 -- 20 / 241088 11 / 39531 1 / 207348 --
pooled tissue 22 / 276455   -- -- 22 / 276455 0 / 0 -- --
prostate 8 / 79993 8 / 107080 3 / 266949 13 / 491794 8 / 79993 8 / 107080 3 / 266949 13 / 491794
retina 3 / 29438 -- 13 / 820326 1 / 88490 3 / 29438 -- 13 / 820326 1 / 88490
salivary gland 1 / 2490   -- -- 1 / 2490 0 / 10368 -- --
skin 6 / 73633 6 / 125377 1024 / 26905847 1155 / 34522313 6 / 73633 6 / 125377 1024 / 26905847 1155 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 4 / 52939   -- -- 4 / 52939 0 / 5 -- --
stem cell -- -- 646 / 6230144 -- -- -- 646 / 6230144 --
stomach   6 / 65644 5 / 124767 6 / 448716 0 / 26641 6 / 65644 5 / 124767 6 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 21 / 143630 7 / 100058 -- 274 / 12372003 21 / 143630 7 / 100058 -- 274 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 3 / 11737 3 / 32606 1 / 115938 4 / 124664 3 / 11737 3 / 32606 1 / 115938 4 / 124664
uncharacterized tissue 17 / 207932 50 / 479819     17 / 207932 50 / 479819 0 / 21833 0 / 51729
uterus 3 / 38063 16 / 133582 103 / 10193077 -- 3 / 38063 16 / 133582 103 / 10193077 --
vascular 2 / 46250 -- 530 / 13135050 -- 2 / 46250 -- 530 / 13135050 --
white blood cells -- -- 29 / 846268 -- -- -- 29 / 846268 --
whole body -- -- -- -- -- -- -- --