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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.743260Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 281 / 3316537 162 / 2498449 2445 / 114162531 2898 / 109592465 281 / 3316537 162 / 2498449 2445 / 114162531 2898 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   4 / 57865 --   0 / 16077 4 / 57865 -- 0 / 83577
bone marrow 3 / 14774   6 / 5047110 7 / 4978364 3 / 14774 0 / 29891 6 / 5047110 7 / 4978364
brain 50 / 506301 20 / 200215 28 / 729526 269 / 4997811 50 / 506301 20 / 200215 28 / 729526 269 / 4997811
cartilage   7 / 37226 -- 7 / 778035 0 / 15965 7 / 37226 -- 7 / 778035
cerebellum 16 / 90353   2 / 90885 97 / 1495938 16 / 90353 0 / 0 2 / 90885 97 / 1495938
cerebrum 10 / 198932   -- -- 10 / 198932 0 / 3422 -- --
cervix   5 / 44577 -- -- 0 / 3888 5 / 44577 -- --
colon 6 / 26551 8 / 151167   11 / 643586 6 / 26551 8 / 151167 0 / 98089 11 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 14 / 246043   -- -- 14 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 12 / 128826 6 / 46440 2 / 85898 252 / 12434232 12 / 128826 6 / 46440 2 / 85898 252 / 12434232
gastrointestinal tract 1 / 28803 1 / 12721   -- 1 / 28803 1 / 12721 0 / 45908 --
heart 1 / 76442   1 / 83063 -- 1 / 76442 0 / 1 1 / 83063 --
kidney 3 / 106627 8 / 89898 3 / 155372 1 / 100281 3 / 106627 8 / 89898 3 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver 4 / 96846 5 / 107249 2 / 66308 1 / 214987 4 / 96846 5 / 107249 2 / 66308 1 / 214987
lung 9 / 128150 7 / 170663 9 / 159917 7 / 159059 9 / 128150 7 / 170663 9 / 159917 7 / 159059
lymph node 1 / 62650   144 / 5278419 87 / 4863489 1 / 62650 0 / 27007 144 / 5278419 87 / 4863489
lymphoreticular 1 / 17836 1 / 44303 -- -- 1 / 17836 1 / 44303 -- --
mammary gland 1 / 46553 8 / 104307 362 / 43166038 799 / 30312656 1 / 46553 8 / 104307 362 / 43166038 799 / 30312656
muscle 4 / 74039   1 / 107836   4 / 74039 0 / 27691 1 / 107836 0 / 61270
nervous 2 / 10333   -- -- 2 / 10333 0 / 8 -- --
ovary 1 / 11462 5 / 89988 2 / 94887 2 / 179472 1 / 11462 5 / 89988 2 / 94887 2 / 179472
pancreas   10 / 74930 1 / 85728 2 / 189999 0 / 7237 10 / 74930 1 / 85728 2 / 189999
pancreatic islet 19 / 96524   -- -- 19 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 46 / 241088 3 / 39531 16 / 207348 -- 46 / 241088 3 / 39531 16 / 207348 --
pooled tissue 30 / 276455   -- -- 30 / 276455 0 / 0 -- --
prostate 5 / 79993 3 / 107080 5 / 266949 12 / 491794 5 / 79993 3 / 107080 5 / 266949 12 / 491794
retina 2 / 29438 -- 33 / 820326 7 / 88490 2 / 29438 -- 33 / 820326 7 / 88490
salivary gland   1 / 10368 -- -- 0 / 2490 1 / 10368 -- --
skin 3 / 73633 10 / 125377 734 / 26905847 913 / 34522313 3 / 73633 10 / 125377 734 / 26905847 913 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 64 / 6230144 -- -- -- 64 / 6230144 --
stomach 1 / 26641 9 / 65644 4 / 124767 5 / 448716 1 / 26641 9 / 65644 4 / 124767 5 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 4 / 143630 6 / 100058 -- 411 / 12372003 4 / 143630 6 / 100058 -- 411 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid   1 / 32606 6 / 115938 6 / 124664 0 / 11737 1 / 32606 6 / 115938 6 / 124664
uncharacterized tissue 14 / 207932 22 / 479819   2 / 51729 14 / 207932 22 / 479819 0 / 21833 2 / 51729
uterus 8 / 38063 10 / 133582 469 / 10193077 -- 8 / 38063 10 / 133582 469 / 10193077 --
vascular 2 / 46250 -- 549 / 13135050 -- 2 / 46250 -- 549 / 13135050 --
white blood cells -- -- 2 / 846268 -- -- -- 2 / 846268 --
whole body -- -- -- -- -- -- -- --