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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.743235Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 187 / 3316537 138 / 2498449 2359 / 114162531 4250 / 109592465 187 / 3316537 138 / 2498449 2359 / 114162531 4250 / 109592465
adrenal cortex -- 4 / 9928 -- -- -- 4 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   6 / 57865 -- 1 / 83577 0 / 16077 6 / 57865 -- 1 / 83577
bone marrow     70 / 5047110 29 / 4978364 0 / 14774 0 / 29891 70 / 5047110 29 / 4978364
brain 22 / 506301 11 / 200215 24 / 729526 104 / 4997811 22 / 506301 11 / 200215 24 / 729526 104 / 4997811
cartilage 2 / 15965 2 / 37226 -- 9 / 778035 2 / 15965 2 / 37226 -- 9 / 778035
cerebellum 6 / 90353   5 / 90885 21 / 1495938 6 / 90353 0 / 0 5 / 90885 21 / 1495938
cerebrum 10 / 198932   -- -- 10 / 198932 0 / 3422 -- --
cervix   1 / 44577 -- -- 0 / 3888 1 / 44577 -- --
colon 1 / 26551 12 / 151167   11 / 643586 1 / 26551 12 / 151167 0 / 98089 11 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 17 / 246043   -- -- 17 / 246043 0 / 38 -- --
endocrine 2 / 19564   -- -- 2 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 2 / 128826 1 / 46440 1 / 85898 480 / 12434232 2 / 128826 1 / 46440 1 / 85898 480 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart 7 / 76442   2 / 83063 -- 7 / 76442 0 / 1 2 / 83063 --
kidney 5 / 106627 7 / 89898 2 / 155372   5 / 106627 7 / 89898 2 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver       2 / 214987 0 / 96846 0 / 107249 0 / 66308 2 / 214987
lung 5 / 128150 14 / 170663   2 / 159059 5 / 128150 14 / 170663 0 / 159917 2 / 159059
lymph node 9 / 62650   99 / 5278419 24 / 4863489 9 / 62650 0 / 27007 99 / 5278419 24 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 6 / 46553 4 / 104307 201 / 43166038 1913 / 30312656 6 / 46553 4 / 104307 201 / 43166038 1913 / 30312656
muscle 3 / 74039   1 / 107836   3 / 74039 0 / 27691 1 / 107836 0 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary   9 / 89988 1 / 94887 5 / 179472 0 / 11462 9 / 89988 1 / 94887 5 / 179472
pancreas   1 / 74930 1 / 85728 3 / 189999 0 / 7237 1 / 74930 1 / 85728 3 / 189999
pancreatic islet 4 / 96524 2 / 30072 -- -- 4 / 96524 2 / 30072 -- --
parathyroid   5 / 20557 -- -- 0 / 24 5 / 20557 -- --
peripheral nervous system 2 / 14891   -- -- 2 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 20 / 241088 1 / 39531   -- 20 / 241088 1 / 39531 0 / 207348 --
pooled tissue 18 / 276455   -- -- 18 / 276455 0 / 0 -- --
prostate 7 / 79993 2 / 107080 2 / 266949 16 / 491794 7 / 79993 2 / 107080 2 / 266949 16 / 491794
retina 7 / 29438 -- 11 / 820326 1 / 88490 7 / 29438 -- 11 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 9 / 73633 6 / 125377 849 / 26905847 1267 / 34522313 9 / 73633 6 / 125377 849 / 26905847 1267 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 100 / 6230144 -- -- -- 100 / 6230144 --
stomach   2 / 65644 4 / 124767 3 / 448716 0 / 26641 2 / 65644 4 / 124767 3 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 12 / 143630 2 / 100058 -- 358 / 12372003 12 / 143630 2 / 100058 -- 358 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     2 / 115938 1 / 124664 0 / 11737 0 / 32606 2 / 115938 1 / 124664
uncharacterized tissue 3 / 207932 36 / 479819 1 / 21833   3 / 207932 36 / 479819 1 / 21833 0 / 51729
uterus 5 / 38063 10 / 133582 420 / 10193077 -- 5 / 38063 10 / 133582 420 / 10193077 --
vascular 1 / 46250 -- 558 / 13135050 -- 1 / 46250 -- 558 / 13135050 --
white blood cells -- -- 5 / 846268 -- -- -- 5 / 846268 --
whole body -- -- -- -- -- -- -- --