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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.740398Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 180 / 3316537 139 / 2498449 6323 / 114162531 8534 / 109592465 180 / 3316537 139 / 2498449 6323 / 114162531 8534 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 14 / 16077 5 / 57865 --   14 / 16077 5 / 57865 -- 0 / 83577
bone marrow 2 / 14774   106 / 5047110 95 / 4978364 2 / 14774 0 / 29891 106 / 5047110 95 / 4978364
brain 9 / 506301 16 / 200215 79 / 729526 873 / 4997811 9 / 506301 16 / 200215 79 / 729526 873 / 4997811
cartilage 1 / 15965 3 / 37226 -- 104 / 778035 1 / 15965 3 / 37226 -- 104 / 778035
cerebellum     3 / 90885 153 / 1495938 0 / 90353 0 / 0 3 / 90885 153 / 1495938
cerebrum 4 / 198932   -- -- 4 / 198932 0 / 3422 -- --
cervix   3 / 44577 -- -- 0 / 3888 3 / 44577 -- --
colon   3 / 151167 3 / 98089 45 / 643586 0 / 26551 3 / 151167 3 / 98089 45 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 21 / 246043   -- -- 21 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 11 / 128826 2 / 46440 8 / 85898 444 / 12434232 11 / 128826 2 / 46440 8 / 85898 444 / 12434232
gastrointestinal tract   1 / 12721 2 / 45908 -- 0 / 28803 1 / 12721 2 / 45908 --
heart     2 / 83063 -- 0 / 76442 0 / 1 2 / 83063 --
kidney 4 / 106627 1 / 89898 5 / 155372 4 / 100281 4 / 106627 1 / 89898 5 / 155372 4 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846 4 / 107249   1 / 214987 2 / 96846 4 / 107249 0 / 66308 1 / 214987
lung 13 / 128150 4 / 170663 9 / 159917 18 / 159059 13 / 128150 4 / 170663 9 / 159917 18 / 159059
lymph node 1 / 62650   40 / 5278419 86 / 4863489 1 / 62650 0 / 27007 40 / 5278419 86 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 1 / 46553 8 / 104307 2342 / 43166038 2030 / 30312656 1 / 46553 8 / 104307 2342 / 43166038 2030 / 30312656
muscle 1 / 74039 1 / 27691 1 / 107836 2 / 61270 1 / 74039 1 / 27691 1 / 107836 2 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary 4 / 11462 8 / 89988 6 / 94887 11 / 179472 4 / 11462 8 / 89988 6 / 94887 11 / 179472
pancreas   9 / 74930 3 / 85728 10 / 189999 0 / 7237 9 / 74930 3 / 85728 10 / 189999
pancreatic islet 9 / 96524 4 / 30072 -- -- 9 / 96524 4 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 3 / 14891   -- -- 3 / 14891 0 / 645 -- --
pineal gland 3 / 6170 -- -- -- 3 / 6170 -- -- --
pituitary gland 4 / 13260   -- -- 4 / 13260 0 / 1358 -- --
placenta 6 / 241088   2 / 207348 -- 6 / 241088 0 / 39531 2 / 207348 --
pooled tissue 26 / 276455   -- -- 26 / 276455 0 / 0 -- --
prostate 4 / 79993 9 / 107080 29 / 266949 28 / 491794 4 / 79993 9 / 107080 29 / 266949 28 / 491794
retina 1 / 29438 -- 26 / 820326 1 / 88490 1 / 29438 -- 26 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 5 / 73633 14 / 125377 797 / 26905847 1824 / 34522313 5 / 73633 14 / 125377 797 / 26905847 1824 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 799 / 6230144 -- -- -- 799 / 6230144 --
stomach 3 / 26641 3 / 65644 7 / 124767 30 / 448716 3 / 26641 3 / 65644 7 / 124767 30 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 7 / 143630 3 / 100058 -- 2766 / 12372003 7 / 143630 3 / 100058 -- 2766 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606 1 / 115938 2 / 124664 0 / 11737 1 / 32606 1 / 115938 2 / 124664
uncharacterized tissue 12 / 207932 23 / 479819   7 / 51729 12 / 207932 23 / 479819 0 / 21833 7 / 51729
uterus   13 / 133582 332 / 10193077 -- 0 / 38063 13 / 133582 332 / 10193077 --
vascular 6 / 46250 -- 1697 / 13135050 -- 6 / 46250 -- 1697 / 13135050 --
white blood cells -- -- 24 / 846268 -- -- -- 24 / 846268 --
whole body -- -- -- -- -- -- -- --