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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.731649Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 69 / 3316537 34 / 2498449 1153 / 114162531 571 / 109592465 69 / 3316537 34 / 2498449 1153 / 114162531 571 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 3 / 57865 --   1 / 16077 3 / 57865 -- 0 / 83577
bone marrow 2 / 14774   36 / 5047110   2 / 14774 0 / 29891 36 / 5047110 0 / 4978364
brain 4 / 506301 10 / 200215 12 / 729526 220 / 4997811 4 / 506301 10 / 200215 12 / 729526 220 / 4997811
cartilage   2 / 37226 -- 1 / 778035 0 / 15965 2 / 37226 -- 1 / 778035
cerebellum       3 / 1495938 0 / 90353 0 / 0 0 / 90885 3 / 1495938
cerebrum 1 / 198932   -- -- 1 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon         0 / 26551 0 / 151167 0 / 98089 0 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 15 / 246043   -- -- 15 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 6 / 128826     53 / 12434232 6 / 128826 0 / 46440 0 / 85898 53 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart 1 / 76442     -- 1 / 76442 0 / 1 0 / 83063 --
kidney 2 / 106627   1 / 155372 1 / 100281 2 / 106627 0 / 89898 1 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846       1 / 96846 0 / 107249 0 / 66308 0 / 214987
lung 3 / 128150 9 / 170663     3 / 128150 9 / 170663 0 / 159917 0 / 159059
lymph node         0 / 62650 0 / 27007 0 / 5278419 0 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland     4 / 43166038 54 / 30312656 0 / 46553 0 / 104307 4 / 43166038 54 / 30312656
muscle   1 / 27691   1 / 61270 0 / 74039 1 / 27691 0 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 3 / 89988 1 / 94887 1 / 179472 1 / 11462 3 / 89988 1 / 94887 1 / 179472
pancreas         0 / 7237 0 / 74930 0 / 85728 0 / 189999
pancreatic islet 5 / 96524   -- -- 5 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 1 / 241088     -- 1 / 241088 0 / 39531 0 / 207348 --
pooled tissue 8 / 276455   -- -- 8 / 276455 0 / 0 -- --
prostate 1 / 79993 1 / 107080 2 / 266949   1 / 79993 1 / 107080 2 / 266949 0 / 491794
retina 3 / 29438 -- 3 / 820326   3 / 29438 -- 3 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 3 / 73633 1 / 125377 406 / 26905847 133 / 34522313 3 / 73633 1 / 125377 406 / 26905847 133 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 187 / 6230144 -- -- -- 187 / 6230144 --
stomach   1 / 65644 1 / 124767   0 / 26641 1 / 65644 1 / 124767 0 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 6 / 143630   -- 100 / 12372003 6 / 143630 0 / 100058 -- 100 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606 2 / 115938 4 / 124664 0 / 11737 1 / 32606 2 / 115938 4 / 124664
uncharacterized tissue 1 / 207932       1 / 207932 0 / 479819 0 / 21833 0 / 51729
uterus 3 / 38063 2 / 133582 498 / 10193077 -- 3 / 38063 2 / 133582 498 / 10193077 --
vascular   --   -- 0 / 46250 -- 0 / 13135050 --
white blood cells -- --   -- -- -- 0 / 846268 --
whole body -- -- -- -- -- -- -- --