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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.727580Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 207 / 3316537 189 / 2498449 826 / 114162531 1939 / 109592465 207 / 3316537 189 / 2498449 826 / 114162531 1939 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   17 / 57865 --   0 / 16077 17 / 57865 -- 0 / 83577
bone marrow   8 / 29891 8 / 5047110 4 / 4978364 0 / 14774 8 / 29891 8 / 5047110 4 / 4978364
brain 9 / 506301 5 / 200215 13 / 729526 55 / 4997811 9 / 506301 5 / 200215 13 / 729526 55 / 4997811
cartilage 1 / 15965 2 / 37226 -- 2 / 778035 1 / 15965 2 / 37226 -- 2 / 778035
cerebellum 1 / 90353     31 / 1495938 1 / 90353 0 / 0 0 / 90885 31 / 1495938
cerebrum 7 / 198932 4 / 3422 -- -- 7 / 198932 4 / 3422 -- --
cervix   2 / 44577 -- -- 0 / 3888 2 / 44577 -- --
colon 1 / 26551 22 / 151167   2 / 643586 1 / 26551 22 / 151167 0 / 98089 2 / 643586
ear 2 / 16130 -- -- -- 2 / 16130 -- -- --
embryonic tissue 14 / 246043   -- -- 14 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 7 / 128826 2 / 46440   34 / 12434232 7 / 128826 2 / 46440 0 / 85898 34 / 12434232
gastrointestinal tract 1 / 28803   1 / 45908 -- 1 / 28803 0 / 12721 1 / 45908 --
heart 9 / 76442   2 / 83063 -- 9 / 76442 0 / 1 2 / 83063 --
kidney 15 / 106627 4 / 89898 1 / 155372   15 / 106627 4 / 89898 1 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 12 / 96846 11 / 107249 3 / 66308 6 / 214987 12 / 96846 11 / 107249 3 / 66308 6 / 214987
lung 23 / 128150 2 / 170663 2 / 159917 3 / 159059 23 / 128150 2 / 170663 2 / 159917 3 / 159059
lymph node 4 / 62650 3 / 27007 105 / 5278419 125 / 4863489 4 / 62650 3 / 27007 105 / 5278419 125 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 3 / 46553 10 / 104307 28 / 43166038 466 / 30312656 3 / 46553 10 / 104307 28 / 43166038 466 / 30312656
muscle 9 / 74039     1 / 61270 9 / 74039 0 / 27691 0 / 107836 1 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary 1 / 11462 5 / 89988 2 / 94887 1 / 179472 1 / 11462 5 / 89988 2 / 94887 1 / 179472
pancreas 2 / 7237     1 / 189999 2 / 7237 0 / 74930 0 / 85728 1 / 189999
pancreatic islet 10 / 96524 14 / 30072 -- -- 10 / 96524 14 / 30072 -- --
parathyroid   5 / 20557 -- -- 0 / 24 5 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 8 / 241088   3 / 207348 -- 8 / 241088 0 / 39531 3 / 207348 --
pooled tissue 12 / 276455   -- -- 12 / 276455 0 / 0 -- --
prostate 12 / 79993 7 / 107080 3 / 266949 8 / 491794 12 / 79993 7 / 107080 3 / 266949 8 / 491794
retina 4 / 29438 -- 12 / 820326 2 / 88490 4 / 29438 -- 12 / 820326 2 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 9 / 73633 4 / 125377 376 / 26905847 350 / 34522313 9 / 73633 4 / 125377 376 / 26905847 350 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 2 / 52939   -- -- 2 / 52939 0 / 5 -- --
stem cell -- -- 43 / 6230144 -- -- -- 43 / 6230144 --
stomach 2 / 26641 5 / 65644   6 / 448716 2 / 26641 5 / 65644 0 / 124767 6 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 5 / 143630 6 / 100058 -- 836 / 12372003 5 / 143630 6 / 100058 -- 836 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid   2 / 32606 6 / 115938 5 / 124664 0 / 11737 2 / 32606 6 / 115938 5 / 124664
uncharacterized tissue 15 / 207932 37 / 479819   1 / 51729 15 / 207932 37 / 479819 0 / 21833 1 / 51729
uterus 2 / 38063 11 / 133582 90 / 10193077 -- 2 / 38063 11 / 133582 90 / 10193077 --
vascular 1 / 46250 -- 125 / 13135050 -- 1 / 46250 -- 125 / 13135050 --
white blood cells -- -- 3 / 846268 -- -- -- 3 / 846268 --
whole body -- -- -- -- -- -- -- --