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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.715623Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 219 / 3316537 140 / 2498449 658 / 114162531 2302 / 109592465 219 / 3316537 140 / 2498449 658 / 114162531 2302 / 109592465
adrenal cortex -- 3 / 9928 -- -- -- 3 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   9 / 57865 --   0 / 16077 9 / 57865 -- 0 / 83577
bone marrow   1 / 29891   31 / 4978364 0 / 14774 1 / 29891 0 / 5047110 31 / 4978364
brain 40 / 506301 3 / 200215 5 / 729526 68 / 4997811 40 / 506301 3 / 200215 5 / 729526 68 / 4997811
cartilage 1 / 15965 4 / 37226 -- 4 / 778035 1 / 15965 4 / 37226 -- 4 / 778035
cerebellum 5 / 90353     7 / 1495938 5 / 90353 0 / 0 0 / 90885 7 / 1495938
cerebrum 36 / 198932 1 / 3422 -- -- 36 / 198932 1 / 3422 -- --
cervix   3 / 44577 -- -- 0 / 3888 3 / 44577 -- --
colon   6 / 151167 2 / 98089 2 / 643586 0 / 26551 6 / 151167 2 / 98089 2 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 9 / 246043   -- -- 9 / 246043 0 / 38 -- --
endocrine 6 / 19564   -- -- 6 / 19564 0 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye 11 / 128826 3 / 46440   97 / 12434232 11 / 128826 3 / 46440 0 / 85898 97 / 12434232
gastrointestinal tract 1 / 28803 1 / 12721   -- 1 / 28803 1 / 12721 0 / 45908 --
heart     1 / 83063 -- 0 / 76442 0 / 1 1 / 83063 --
kidney 3 / 106627 11 / 89898   1 / 100281 3 / 106627 11 / 89898 0 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846 9 / 107249   2 / 214987 2 / 96846 9 / 107249 0 / 66308 2 / 214987
lung 11 / 128150 6 / 170663 3 / 159917 3 / 159059 11 / 128150 6 / 170663 3 / 159917 3 / 159059
lymph node     28 / 5278419 10 / 4863489 0 / 62650 0 / 27007 28 / 5278419 10 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 13 / 46553 4 / 104307 45 / 43166038 881 / 30312656 13 / 46553 4 / 104307 45 / 43166038 881 / 30312656
muscle 3 / 74039       3 / 74039 0 / 27691 0 / 107836 0 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary   3 / 89988   2 / 179472 0 / 11462 3 / 89988 0 / 94887 2 / 179472
pancreas   1 / 74930 1 / 85728   0 / 7237 1 / 74930 1 / 85728 0 / 189999
pancreatic islet 3 / 96524   -- -- 3 / 96524 0 / 30072 -- --
parathyroid   2 / 20557 -- -- 0 / 24 2 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 20 / 241088 1 / 39531   -- 20 / 241088 1 / 39531 0 / 207348 --
pooled tissue 15 / 276455   -- -- 15 / 276455 0 / 0 -- --
prostate 4 / 79993 9 / 107080 1 / 266949 3 / 491794 4 / 79993 9 / 107080 1 / 266949 3 / 491794
retina 1 / 29438 -- 9 / 820326 1 / 88490 1 / 29438 -- 9 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 4 / 73633 1 / 125377 226 / 26905847 1000 / 34522313 4 / 73633 1 / 125377 226 / 26905847 1000 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 3 / 52939   -- -- 3 / 52939 0 / 5 -- --
stem cell -- -- 103 / 6230144 -- -- -- 103 / 6230144 --
stomach 2 / 26641 8 / 65644   15 / 448716 2 / 26641 8 / 65644 0 / 124767 15 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 9 / 143630 2 / 100058 -- 173 / 12372003 9 / 143630 2 / 100058 -- 173 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid 1 / 11737 2 / 32606 2 / 115938 1 / 124664 1 / 11737 2 / 32606 2 / 115938 1 / 124664
uncharacterized tissue 11 / 207932 37 / 479819   1 / 51729 11 / 207932 37 / 479819 0 / 21833 1 / 51729
uterus 1 / 38063 7 / 133582 104 / 10193077 -- 1 / 38063 7 / 133582 104 / 10193077 --
vascular 1 / 46250 -- 124 / 13135050 -- 1 / 46250 -- 124 / 13135050 --
white blood cells -- -- 4 / 846268 -- -- -- 4 / 846268 --
whole body -- -- -- -- -- -- -- --