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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.658598Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 30 / 3316537 54 / 2498449 3222 / 114162531 1646 / 109592465 30 / 3316537 54 / 2498449 3222 / 114162531 1646 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   1 / 57865 --   0 / 16077 1 / 57865 -- 0 / 83577
bone marrow   1 / 29891 196 / 5047110 173 / 4978364 0 / 14774 1 / 29891 196 / 5047110 173 / 4978364
brain 7 / 506301 3 / 200215 10 / 729526 113 / 4997811 7 / 506301 3 / 200215 10 / 729526 113 / 4997811
cartilage     -- 5 / 778035 0 / 15965 0 / 37226 -- 5 / 778035
cerebellum 1 / 90353   4 / 90885 29 / 1495938 1 / 90353 0 / 0 4 / 90885 29 / 1495938
cerebrum 2 / 198932   -- -- 2 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon   1 / 151167 2 / 98089 11 / 643586 0 / 26551 1 / 151167 2 / 98089 11 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 3 / 246043   -- -- 3 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 4 / 128826 1 / 46440 1 / 85898 62 / 12434232 4 / 128826 1 / 46440 1 / 85898 62 / 12434232
gastrointestinal tract   1 / 12721 2 / 45908 -- 0 / 28803 1 / 12721 2 / 45908 --
heart     1 / 83063 -- 0 / 76442 0 / 1 1 / 83063 --
kidney     3 / 155372 3 / 100281 0 / 106627 0 / 89898 3 / 155372 3 / 100281
limb -- -- -- -- -- -- -- --
liver   1 / 107249   6 / 214987 0 / 96846 1 / 107249 0 / 66308 6 / 214987
lung   4 / 170663 2 / 159917   0 / 128150 4 / 170663 2 / 159917 0 / 159059
lymph node     55 / 5278419 26 / 4863489 0 / 62650 0 / 27007 55 / 5278419 26 / 4863489
lymphoreticular   10 / 44303 -- -- 0 / 17836 10 / 44303 -- --
mammary gland   2 / 104307 1947 / 43166038 676 / 30312656 0 / 46553 2 / 104307 1947 / 43166038 676 / 30312656
muscle 1 / 74039   1 / 107836 4 / 61270 1 / 74039 0 / 27691 1 / 107836 4 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary     3 / 94887 4 / 179472 0 / 11462 0 / 89988 3 / 94887 4 / 179472
pancreas     1 / 85728 4 / 189999 0 / 7237 0 / 74930 1 / 85728 4 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta   2 / 39531 5 / 207348 -- 0 / 241088 2 / 39531 5 / 207348 --
pooled tissue 1 / 276455   -- -- 1 / 276455 0 / 0 -- --
prostate 1 / 79993 4 / 107080   8 / 491794 1 / 79993 4 / 107080 0 / 266949 8 / 491794
retina   -- 9 / 820326 1 / 88490 0 / 29438 -- 9 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin   3 / 125377 391 / 26905847 391 / 34522313 0 / 73633 3 / 125377 391 / 26905847 391 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 26 / 6230144 -- -- -- 26 / 6230144 --
stomach   3 / 65644 2 / 124767 8 / 448716 0 / 26641 3 / 65644 2 / 124767 8 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 1 / 143630 1 / 100058 -- 119 / 12372003 1 / 143630 1 / 100058 -- 119 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     1 / 115938   0 / 11737 0 / 32606 1 / 115938 0 / 124664
uncharacterized tissue 4 / 207932 14 / 479819   3 / 51729 4 / 207932 14 / 479819 0 / 21833 3 / 51729
uterus 1 / 38063 2 / 133582 496 / 10193077 -- 1 / 38063 2 / 133582 496 / 10193077 --
vascular   -- 51 / 13135050 -- 0 / 46250 -- 51 / 13135050 --
white blood cells -- -- 13 / 846268 -- -- -- 13 / 846268 --
whole body -- -- -- -- -- -- -- --