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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.655424Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 747 / 3316537 739 / 2498449 130 / 114162531 181 / 109592465 747 / 3316537 739 / 2498449 130 / 114162531 181 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 1 / 57865 -- 1 / 83577 1 / 16077 1 / 57865 -- 1 / 83577
bone marrow 3 / 14774 13 / 29891 10 / 5047110 13 / 4978364 3 / 14774 13 / 29891 10 / 5047110 13 / 4978364
brain 56 / 506301 75 / 200215 1 / 729526 9 / 4997811 56 / 506301 75 / 200215 1 / 729526 9 / 4997811
cartilage     -- 4 / 778035 0 / 15965 0 / 37226 -- 4 / 778035
cerebellum 70 / 90353     14 / 1495938 70 / 90353 0 / 0 0 / 90885 14 / 1495938
cerebrum 10 / 198932   -- -- 10 / 198932 0 / 3422 -- --
cervix 6 / 3888 20 / 44577 -- -- 6 / 3888 20 / 44577 -- --
colon 2 / 26551 28 / 151167 1 / 98089 11 / 643586 2 / 26551 28 / 151167 1 / 98089 11 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 242 / 246043   -- -- 242 / 246043 0 / 38 -- --
endocrine 3 / 19564   -- -- 3 / 19564 0 / 2857 -- --
esophagus 1 / 270 5 / 17290 -- -- 1 / 270 5 / 17290 -- --
eye 16 / 128826 36 / 46440 1 / 85898 3 / 12434232 16 / 128826 36 / 46440 1 / 85898 3 / 12434232
gastrointestinal tract 10 / 28803 2 / 12721   -- 10 / 28803 2 / 12721 0 / 45908 --
heart 16 / 76442     -- 16 / 76442 0 / 1 0 / 83063 --
kidney 26 / 106627 9 / 89898 1 / 155372 1 / 100281 26 / 106627 9 / 89898 1 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver 9 / 96846 25 / 107249   2 / 214987 9 / 96846 25 / 107249 0 / 66308 2 / 214987
lung 16 / 128150 57 / 170663 3 / 159917 1 / 159059 16 / 128150 57 / 170663 3 / 159917 1 / 159059
lymph node 3 / 62650 1 / 27007   3 / 4863489 3 / 62650 1 / 27007 0 / 5278419 3 / 4863489
lymphoreticular 22 / 17836 33 / 44303 -- -- 22 / 17836 33 / 44303 -- --
mammary gland   9 / 104307 48 / 43166038 60 / 30312656 0 / 46553 9 / 104307 48 / 43166038 60 / 30312656
muscle 5 / 74039 60 / 27691 1 / 107836 1 / 61270 5 / 74039 60 / 27691 1 / 107836 1 / 61270
nervous 3 / 10333   -- -- 3 / 10333 0 / 8 -- --
ovary 9 / 11462 22 / 89988 1 / 94887 2 / 179472 9 / 11462 22 / 89988 1 / 94887 2 / 179472
pancreas   5 / 74930   1 / 189999 0 / 7237 5 / 74930 0 / 85728 1 / 189999
pancreatic islet 10 / 96524 3 / 30072 -- -- 10 / 96524 3 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 3 / 13260   -- -- 3 / 13260 0 / 1358 -- --
placenta 16 / 241088 43 / 39531 1 / 207348 -- 16 / 241088 43 / 39531 1 / 207348 --
pooled tissue 19 / 276455   -- -- 19 / 276455 0 / 0 -- --
prostate 13 / 79993 21 / 107080 1 / 266949 5 / 491794 13 / 79993 21 / 107080 1 / 266949 5 / 491794
retina   -- 1 / 820326   0 / 29438 -- 1 / 820326 0 / 88490
salivary gland   3 / 10368 -- -- 0 / 2490 3 / 10368 -- --
skin 2 / 73633 53 / 125377     2 / 73633 53 / 125377 0 / 26905847 0 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 8 / 52939   -- -- 8 / 52939 0 / 5 -- --
stem cell -- -- 42 / 6230144 -- -- -- 42 / 6230144 --
stomach 7 / 26641 13 / 65644     7 / 26641 13 / 65644 0 / 124767 0 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 18 / 143630 33 / 100058 -- 49 / 12372003 18 / 143630 33 / 100058 -- 49 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 1 / 11737 4 / 32606 1 / 115938   1 / 11737 4 / 32606 1 / 115938 0 / 124664
uncharacterized tissue 106 / 207932 128 / 479819   1 / 51729 106 / 207932 128 / 479819 0 / 21833 1 / 51729
uterus   36 / 133582 12 / 10193077 -- 0 / 38063 36 / 133582 12 / 10193077 --
vascular 5 / 46250 -- 4 / 13135050 -- 5 / 46250 -- 4 / 13135050 --
white blood cells -- -- 1 / 846268 -- -- -- 1 / 846268 --
whole body -- -- -- -- -- -- -- --