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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.655012Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 137 / 3316537 279 / 2498449 3256 / 114162531 3336 / 109592465 137 / 3316537 279 / 2498449 3256 / 114162531 3336 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   6 / 57865 -- 2 / 83577 0 / 16077 6 / 57865 -- 2 / 83577
bone marrow 1 / 14774 1 / 29891 16 / 5047110 8 / 4978364 1 / 14774 1 / 29891 16 / 5047110 8 / 4978364
brain 8 / 506301 21 / 200215 33 / 729526 182 / 4997811 8 / 506301 21 / 200215 33 / 729526 182 / 4997811
cartilage   1 / 37226 -- 36 / 778035 0 / 15965 1 / 37226 -- 36 / 778035
cerebellum 1 / 90353   3 / 90885 23 / 1495938 1 / 90353 0 / 0 3 / 90885 23 / 1495938
cerebrum 3 / 198932   -- -- 3 / 198932 0 / 3422 -- --
cervix   6 / 44577 -- -- 0 / 3888 6 / 44577 -- --
colon 2 / 26551 14 / 151167 25 / 98089 41 / 643586 2 / 26551 14 / 151167 25 / 98089 41 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 9 / 246043   -- -- 9 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 19 / 128826 3 / 46440 2 / 85898 130 / 12434232 19 / 128826 3 / 46440 2 / 85898 130 / 12434232
gastrointestinal tract 1 / 28803 1 / 12721   -- 1 / 28803 1 / 12721 0 / 45908 --
heart 4 / 76442   3 / 83063 -- 4 / 76442 0 / 1 3 / 83063 --
kidney 5 / 106627 11 / 89898 13 / 155372 6 / 100281 5 / 106627 11 / 89898 13 / 155372 6 / 100281
limb -- -- -- -- -- -- -- --
liver 3 / 96846 9 / 107249 1 / 66308 3 / 214987 3 / 96846 9 / 107249 1 / 66308 3 / 214987
lung 6 / 128150 12 / 170663 18 / 159917 6 / 159059 6 / 128150 12 / 170663 18 / 159917 6 / 159059
lymph node     11 / 5278419 2 / 4863489 0 / 62650 0 / 27007 11 / 5278419 2 / 4863489
lymphoreticular 2 / 17836 3 / 44303 -- -- 2 / 17836 3 / 44303 -- --
mammary gland 2 / 46553 14 / 104307 1599 / 43166038 1231 / 30312656 2 / 46553 14 / 104307 1599 / 43166038 1231 / 30312656
muscle   11 / 27691 2 / 107836 4 / 61270 0 / 74039 11 / 27691 2 / 107836 4 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 2 / 11462 10 / 89988 13 / 94887 23 / 179472 2 / 11462 10 / 89988 13 / 94887 23 / 179472
pancreas   26 / 74930 2 / 85728 27 / 189999 0 / 7237 26 / 74930 2 / 85728 27 / 189999
pancreatic islet 9 / 96524   -- -- 9 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 20 / 241088   3 / 207348 -- 20 / 241088 0 / 39531 3 / 207348 --
pooled tissue 14 / 276455   -- -- 14 / 276455 0 / 0 -- --
prostate 1 / 79993 19 / 107080 11 / 266949 26 / 491794 1 / 79993 19 / 107080 11 / 266949 26 / 491794
retina 5 / 29438 -- 22 / 820326   5 / 29438 -- 22 / 820326 0 / 88490
salivary gland   3 / 10368 -- -- 0 / 2490 3 / 10368 -- --
skin 1 / 73633 40 / 125377 720 / 26905847 1207 / 34522313 1 / 73633 40 / 125377 720 / 26905847 1207 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 3 / 52939   -- -- 3 / 52939 0 / 5 -- --
stem cell -- -- 148 / 6230144 -- -- -- 148 / 6230144 --
stomach 3 / 26641 2 / 65644 1 / 124767 24 / 448716 3 / 26641 2 / 65644 1 / 124767 24 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 4 / 143630 3 / 100058 -- 353 / 12372003 4 / 143630 3 / 100058 -- 353 / 12372003
thymus   1 / 165 -- -- 0 / 4478 1 / 165 -- --
thyroid     3 / 115938 2 / 124664 0 / 11737 0 / 32606 3 / 115938 2 / 124664
uncharacterized tissue 2 / 207932 31 / 479819 1 / 21833   2 / 207932 31 / 479819 1 / 21833 0 / 51729
uterus 2 / 38063 31 / 133582 177 / 10193077 -- 2 / 38063 31 / 133582 177 / 10193077 --
vascular 2 / 46250 -- 422 / 13135050 -- 2 / 46250 -- 422 / 13135050 --
white blood cells -- -- 7 / 846268 -- -- -- 7 / 846268 --
whole body -- -- -- -- -- -- -- --