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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.655010Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 194 / 3316537 265 / 2498449 1228 / 114162531 2103 / 109592465 194 / 3316537 265 / 2498449 1228 / 114162531 2103 / 109592465
adrenal cortex -- 4 / 9928 -- -- -- 4 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   7 / 57865 -- 1 / 83577 0 / 16077 7 / 57865 -- 1 / 83577
bone marrow   4 / 29891 23 / 5047110 77 / 4978364 0 / 14774 4 / 29891 23 / 5047110 77 / 4978364
brain 18 / 506301 26 / 200215 14 / 729526 166 / 4997811 18 / 506301 26 / 200215 14 / 729526 166 / 4997811
cartilage   6 / 37226 -- 25 / 778035 0 / 15965 6 / 37226 -- 25 / 778035
cerebellum 2 / 90353   1 / 90885 43 / 1495938 2 / 90353 0 / 0 1 / 90885 43 / 1495938
cerebrum 5 / 198932   -- -- 5 / 198932 0 / 3422 -- --
cervix 1 / 3888 7 / 44577 -- -- 1 / 3888 7 / 44577 -- --
colon 4 / 26551 16 / 151167 2 / 98089 14 / 643586 4 / 26551 16 / 151167 2 / 98089 14 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 20 / 246043   -- -- 20 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 5 / 128826 13 / 46440 4 / 85898 157 / 12434232 5 / 128826 13 / 46440 4 / 85898 157 / 12434232
gastrointestinal tract   3 / 12721 1 / 45908 -- 0 / 28803 3 / 12721 1 / 45908 --
heart 13 / 76442   12 / 83063 -- 13 / 76442 0 / 1 12 / 83063 --
kidney 5 / 106627 9 / 89898 6 / 155372 4 / 100281 5 / 106627 9 / 89898 6 / 155372 4 / 100281
limb -- -- -- -- -- -- -- --
liver 4 / 96846 15 / 107249   1 / 214987 4 / 96846 15 / 107249 0 / 66308 1 / 214987
lung 6 / 128150 8 / 170663 2 / 159917 3 / 159059 6 / 128150 8 / 170663 2 / 159917 3 / 159059
lymph node 2 / 62650   96 / 5278419 79 / 4863489 2 / 62650 0 / 27007 96 / 5278419 79 / 4863489
lymphoreticular   2 / 44303 -- -- 0 / 17836 2 / 44303 -- --
mammary gland 4 / 46553 9 / 104307 488 / 43166038 495 / 30312656 4 / 46553 9 / 104307 488 / 43166038 495 / 30312656
muscle 18 / 74039 4 / 27691 10 / 107836   18 / 74039 4 / 27691 10 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 2 / 11462 7 / 89988 3 / 94887 5 / 179472 2 / 11462 7 / 89988 3 / 94887 5 / 179472
pancreas   2 / 74930 6 / 85728 8 / 189999 0 / 7237 2 / 74930 6 / 85728 8 / 189999
pancreatic islet 2 / 96524   -- -- 2 / 96524 0 / 30072 -- --
parathyroid   3 / 20557 -- -- 0 / 24 3 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 22 / 241088 2 / 39531 4 / 207348 -- 22 / 241088 2 / 39531 4 / 207348 --
pooled tissue 22 / 276455   -- -- 22 / 276455 0 / 0 -- --
prostate   3 / 107080 2 / 266949 9 / 491794 0 / 79993 3 / 107080 2 / 266949 9 / 491794
retina 1 / 29438 -- 20 / 820326 3 / 88490 1 / 29438 -- 20 / 820326 3 / 88490
salivary gland   1 / 10368 -- -- 0 / 2490 1 / 10368 -- --
skin 12 / 73633 23 / 125377 65 / 26905847 156 / 34522313 12 / 73633 23 / 125377 65 / 26905847 156 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 213 / 6230144 -- -- -- 213 / 6230144 --
stomach 2 / 26641 8 / 65644 5 / 124767 24 / 448716 2 / 26641 8 / 65644 5 / 124767 24 / 448716
synovium   1 / 1650 -- -- 0 / 249 1 / 1650 -- --
testis 4 / 143630 6 / 100058 -- 822 / 12372003 4 / 143630 6 / 100058 -- 822 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   2 / 32606 1 / 115938 6 / 124664 0 / 11737 2 / 32606 1 / 115938 6 / 124664
uncharacterized tissue 12 / 207932 60 / 479819 1 / 21833 5 / 51729 12 / 207932 60 / 479819 1 / 21833 5 / 51729
uterus 5 / 38063 13 / 133582 106 / 10193077 -- 5 / 38063 13 / 133582 106 / 10193077 --
vascular 2 / 46250 -- 130 / 13135050 -- 2 / 46250 -- 130 / 13135050 --
white blood cells -- -- 13 / 846268 -- -- -- 13 / 846268 --
whole body -- -- -- -- -- -- -- --