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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.654792Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 213 / 3316537 199 / 2498449 2319 / 114162531 2287 / 109592465 213 / 3316537 199 / 2498449 2319 / 114162531 2287 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 2 / 16077 4 / 57865 -- 8 / 83577 2 / 16077 4 / 57865 -- 8 / 83577
bone marrow 1 / 14774   12 / 5047110 20 / 4978364 1 / 14774 0 / 29891 12 / 5047110 20 / 4978364
brain 23 / 506301 18 / 200215 34 / 729526 117 / 4997811 23 / 506301 18 / 200215 34 / 729526 117 / 4997811
cartilage 1 / 15965 2 / 37226 -- 28 / 778035 1 / 15965 2 / 37226 -- 28 / 778035
cerebellum     1 / 90885 15 / 1495938 0 / 90353 0 / 0 1 / 90885 15 / 1495938
cerebrum 3 / 198932   -- -- 3 / 198932 0 / 3422 -- --
cervix   4 / 44577 -- -- 0 / 3888 4 / 44577 -- --
colon   15 / 151167 5 / 98089 25 / 643586 0 / 26551 15 / 151167 5 / 98089 25 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 11 / 246043   -- -- 11 / 246043 0 / 38 -- --
endocrine 3 / 19564   -- -- 3 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 9 / 128826 1 / 46440   174 / 12434232 9 / 128826 1 / 46440 0 / 85898 174 / 12434232
gastrointestinal tract 1 / 28803 1 / 12721 2 / 45908 -- 1 / 28803 1 / 12721 2 / 45908 --
heart 6 / 76442   1 / 83063 -- 6 / 76442 0 / 1 1 / 83063 --
kidney 6 / 106627   2 / 155372 3 / 100281 6 / 106627 0 / 89898 2 / 155372 3 / 100281
limb -- -- -- -- -- -- -- --
liver 4 / 96846 18 / 107249 3 / 66308 1 / 214987 4 / 96846 18 / 107249 3 / 66308 1 / 214987
lung 4 / 128150 24 / 170663 2 / 159917 12 / 159059 4 / 128150 24 / 170663 2 / 159917 12 / 159059
lymph node 13 / 62650 3 / 27007 109 / 5278419 9 / 4863489 13 / 62650 3 / 27007 109 / 5278419 9 / 4863489
lymphoreticular 2 / 17836 4 / 44303 -- -- 2 / 17836 4 / 44303 -- --
mammary gland 4 / 46553 13 / 104307 790 / 43166038 892 / 30312656 4 / 46553 13 / 104307 790 / 43166038 892 / 30312656
muscle 3 / 74039     4 / 61270 3 / 74039 0 / 27691 0 / 107836 4 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   10 / 89988 4 / 94887 7 / 179472 0 / 11462 10 / 89988 4 / 94887 7 / 179472
pancreas   5 / 74930 1 / 85728 9 / 189999 0 / 7237 5 / 74930 1 / 85728 9 / 189999
pancreatic islet 13 / 96524   -- -- 13 / 96524 0 / 30072 -- --
parathyroid   3 / 20557 -- -- 0 / 24 3 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 27 / 241088 2 / 39531   -- 27 / 241088 2 / 39531 0 / 207348 --
pooled tissue 27 / 276455   -- -- 27 / 276455 0 / 0 -- --
prostate 1 / 79993 9 / 107080 1 / 266949 18 / 491794 1 / 79993 9 / 107080 1 / 266949 18 / 491794
retina 12 / 29438 -- 4 / 820326 1 / 88490 12 / 29438 -- 4 / 820326 1 / 88490
salivary gland   2 / 10368 -- -- 0 / 2490 2 / 10368 -- --
skin 5 / 73633 6 / 125377 326 / 26905847 629 / 34522313 5 / 73633 6 / 125377 326 / 26905847 629 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 4 / 52939   -- -- 4 / 52939 0 / 5 -- --
stem cell -- -- 220 / 6230144 -- -- -- 220 / 6230144 --
stomach 3 / 26641 5 / 65644 3 / 124767 19 / 448716 3 / 26641 5 / 65644 3 / 124767 19 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 7 / 143630 2 / 100058 -- 295 / 12372003 7 / 143630 2 / 100058 -- 295 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid   1 / 32606 2 / 115938 1 / 124664 0 / 11737 1 / 32606 2 / 115938 1 / 124664
uncharacterized tissue 11 / 207932 39 / 479819 3 / 21833   11 / 207932 39 / 479819 3 / 21833 0 / 51729
uterus 2 / 38063 7 / 133582 215 / 10193077 -- 2 / 38063 7 / 133582 215 / 10193077 --
vascular 1 / 46250 -- 457 / 13135050 -- 1 / 46250 -- 457 / 13135050 --
white blood cells -- -- 122 / 846268 -- -- -- 122 / 846268 --
whole body -- -- -- -- -- -- -- --