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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.654649Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 352 / 3316537 354 / 2498449 2293 / 114162531 2008 / 109592465 352 / 3316537 354 / 2498449 2293 / 114162531 2008 / 109592465
adrenal cortex -- 3 / 9928 -- -- -- 3 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 13 / 57865 -- 15 / 83577 1 / 16077 13 / 57865 -- 15 / 83577
bone marrow 1 / 14774   4 / 5047110 2 / 4978364 1 / 14774 0 / 29891 4 / 5047110 2 / 4978364
brain 62 / 506301 14 / 200215 35 / 729526 166 / 4997811 62 / 506301 14 / 200215 35 / 729526 166 / 4997811
cartilage 4 / 15965 8 / 37226 -- 31 / 778035 4 / 15965 8 / 37226 -- 31 / 778035
cerebellum 2 / 90353     11 / 1495938 2 / 90353 0 / 0 0 / 90885 11 / 1495938
cerebrum 26 / 198932 2 / 3422 -- -- 26 / 198932 2 / 3422 -- --
cervix   9 / 44577 -- -- 0 / 3888 9 / 44577 -- --
colon 3 / 26551 13 / 151167 2 / 98089 7 / 643586 3 / 26551 13 / 151167 2 / 98089 7 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 33 / 246043   -- -- 33 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye 22 / 128826 1 / 46440 4 / 85898 102 / 12434232 22 / 128826 1 / 46440 4 / 85898 102 / 12434232
gastrointestinal tract 2 / 28803 3 / 12721   -- 2 / 28803 3 / 12721 0 / 45908 --
heart 10 / 76442     -- 10 / 76442 0 / 1 0 / 83063 --
kidney 12 / 106627 13 / 89898 4 / 155372 2 / 100281 12 / 106627 13 / 89898 4 / 155372 2 / 100281
limb -- -- -- -- -- -- -- --
liver 19 / 96846 12 / 107249 3 / 66308 1 / 214987 19 / 96846 12 / 107249 3 / 66308 1 / 214987
lung 7 / 128150 25 / 170663 7 / 159917 3 / 159059 7 / 128150 25 / 170663 7 / 159917 3 / 159059
lymph node 2 / 62650   14 / 5278419   2 / 62650 0 / 27007 14 / 5278419 0 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland 3 / 46553 13 / 104307 1392 / 43166038 899 / 30312656 3 / 46553 13 / 104307 1392 / 43166038 899 / 30312656
muscle 7 / 74039   1 / 107836 1 / 61270 7 / 74039 0 / 27691 1 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   17 / 89988 1 / 94887 9 / 179472 0 / 11462 17 / 89988 1 / 94887 9 / 179472
pancreas   18 / 74930   2 / 189999 0 / 7237 18 / 74930 0 / 85728 2 / 189999
pancreatic islet 4 / 96524   -- -- 4 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 19 / 241088 2 / 39531 2 / 207348 -- 19 / 241088 2 / 39531 2 / 207348 --
pooled tissue 32 / 276455   -- -- 32 / 276455 0 / 0 -- --
prostate 3 / 79993 30 / 107080 2 / 266949 12 / 491794 3 / 79993 30 / 107080 2 / 266949 12 / 491794
retina 3 / 29438 -- 10 / 820326   3 / 29438 -- 10 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 23 / 73633 12 / 125377 106 / 26905847 439 / 34522313 23 / 73633 12 / 125377 106 / 26905847 439 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 2 / 52939   -- -- 2 / 52939 0 / 5 -- --
stem cell -- -- 118 / 6230144 -- -- -- 118 / 6230144 --
stomach 3 / 26641 8 / 65644 1 / 124767 7 / 448716 3 / 26641 8 / 65644 1 / 124767 7 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 10 / 143630 53 / 100058 -- 297 / 12372003 10 / 143630 53 / 100058 -- 297 / 12372003
thymus 2 / 4478   -- -- 2 / 4478 0 / 165 -- --
thyroid 5 / 11737 1 / 32606 1 / 115938   5 / 11737 1 / 32606 1 / 115938 0 / 124664
uncharacterized tissue 14 / 207932 73 / 479819   2 / 51729 14 / 207932 73 / 479819 0 / 21833 2 / 51729
uterus 8 / 38063 7 / 133582 209 / 10193077 -- 8 / 38063 7 / 133582 209 / 10193077 --
vascular 7 / 46250 -- 357 / 13135050 -- 7 / 46250 -- 357 / 13135050 --
white blood cells -- -- 20 / 846268 -- -- -- 20 / 846268 --
whole body -- -- -- -- -- -- -- --