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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.654643Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 127 / 3316537 173 / 2498449 352 / 114162531 757 / 109592465 127 / 3316537 173 / 2498449 352 / 114162531 757 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   5 / 57865 --   0 / 16077 5 / 57865 -- 0 / 83577
bone marrow 1 / 14774 6 / 29891 4 / 5047110 9 / 4978364 1 / 14774 6 / 29891 4 / 5047110 9 / 4978364
brain 18 / 506301 18 / 200215   17 / 4997811 18 / 506301 18 / 200215 0 / 729526 17 / 4997811
cartilage 1 / 15965   -- 1 / 778035 1 / 15965 0 / 37226 -- 1 / 778035
cerebellum 7 / 90353     12 / 1495938 7 / 90353 0 / 0 0 / 90885 12 / 1495938
cerebrum 7 / 198932   -- -- 7 / 198932 0 / 3422 -- --
cervix   5 / 44577 -- -- 0 / 3888 5 / 44577 -- --
colon 3 / 26551 6 / 151167   1 / 643586 3 / 26551 6 / 151167 0 / 98089 1 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 18 / 246043   -- -- 18 / 246043 0 / 38 -- --
endocrine 2 / 19564   -- -- 2 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 3 / 128826 1 / 46440   68 / 12434232 3 / 128826 1 / 46440 0 / 85898 68 / 12434232
gastrointestinal tract   1 / 12721   -- 0 / 28803 1 / 12721 0 / 45908 --
heart 6 / 76442     -- 6 / 76442 0 / 1 0 / 83063 --
kidney 3 / 106627   1 / 155372   3 / 106627 0 / 89898 1 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 4 / 96846 6 / 107249   1 / 214987 4 / 96846 6 / 107249 0 / 66308 1 / 214987
lung 4 / 128150 24 / 170663   1 / 159059 4 / 128150 24 / 170663 0 / 159917 1 / 159059
lymph node 1 / 62650   18 / 5278419 44 / 4863489 1 / 62650 0 / 27007 18 / 5278419 44 / 4863489
lymphoreticular 1 / 17836 3 / 44303 -- -- 1 / 17836 3 / 44303 -- --
mammary gland 1 / 46553 4 / 104307 67 / 43166038 137 / 30312656 1 / 46553 4 / 104307 67 / 43166038 137 / 30312656
muscle 2 / 74039 5 / 27691     2 / 74039 5 / 27691 0 / 107836 0 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary 1 / 11462 8 / 89988 3 / 94887 1 / 179472 1 / 11462 8 / 89988 3 / 94887 1 / 179472
pancreas   5 / 74930     0 / 7237 5 / 74930 0 / 85728 0 / 189999
pancreatic islet 5 / 96524   -- -- 5 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 9 / 241088     -- 9 / 241088 0 / 39531 0 / 207348 --
pooled tissue 11 / 276455   -- -- 11 / 276455 0 / 0 -- --
prostate 1 / 79993 15 / 107080   2 / 491794 1 / 79993 15 / 107080 0 / 266949 2 / 491794
retina   -- 3 / 820326   0 / 29438 -- 3 / 820326 0 / 88490
salivary gland   3 / 10368 -- -- 0 / 2490 3 / 10368 -- --
skin   16 / 125377 107 / 26905847 82 / 34522313 0 / 73633 16 / 125377 107 / 26905847 82 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 2 / 52939   -- -- 2 / 52939 0 / 5 -- --
stem cell -- -- 36 / 6230144 -- -- -- 36 / 6230144 --
stomach   3 / 65644   1 / 448716 0 / 26641 3 / 65644 0 / 124767 1 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 3 / 143630 2 / 100058 -- 378 / 12372003 3 / 143630 2 / 100058 -- 378 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606 3 / 115938 2 / 124664 0 / 11737 1 / 32606 3 / 115938 2 / 124664
uncharacterized tissue 8 / 207932 23 / 479819     8 / 207932 23 / 479819 0 / 21833 0 / 51729
uterus   12 / 133582 31 / 10193077 -- 0 / 38063 12 / 133582 31 / 10193077 --
vascular 2 / 46250 -- 69 / 13135050 -- 2 / 46250 -- 69 / 13135050 --
white blood cells -- -- 10 / 846268 -- -- -- 10 / 846268 --
whole body -- -- -- -- -- -- -- --