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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.654583Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 120 / 3316537 119 / 2498449 2886 / 114162531 416 / 109592465 120 / 3316537 119 / 2498449 2886 / 114162531 416 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   3 / 57865 --   0 / 16077 3 / 57865 -- 0 / 83577
bone marrow   2 / 29891 3 / 5047110 19 / 4978364 0 / 14774 2 / 29891 3 / 5047110 19 / 4978364
brain 15 / 506301 16 / 200215 7 / 729526 40 / 4997811 15 / 506301 16 / 200215 7 / 729526 40 / 4997811
cartilage   1 / 37226 -- 6 / 778035 0 / 15965 1 / 37226 -- 6 / 778035
cerebellum 1 / 90353     5 / 1495938 1 / 90353 0 / 0 0 / 90885 5 / 1495938
cerebrum 1 / 198932   -- -- 1 / 198932 0 / 3422 -- --
cervix   4 / 44577 -- -- 0 / 3888 4 / 44577 -- --
colon   5 / 151167 2 / 98089 14 / 643586 0 / 26551 5 / 151167 2 / 98089 14 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 7 / 246043   -- -- 7 / 246043 0 / 38 -- --
endocrine 2 / 19564   -- -- 2 / 19564 0 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye 10 / 128826 2 / 46440 2 / 85898 9 / 12434232 10 / 128826 2 / 46440 2 / 85898 9 / 12434232
gastrointestinal tract 2 / 28803     -- 2 / 28803 0 / 12721 0 / 45908 --
heart 2 / 76442     -- 2 / 76442 0 / 1 0 / 83063 --
kidney 3 / 106627 4 / 89898 1 / 155372 1 / 100281 3 / 106627 4 / 89898 1 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846 4 / 107249   1 / 214987 2 / 96846 4 / 107249 0 / 66308 1 / 214987
lung 4 / 128150 7 / 170663   1 / 159059 4 / 128150 7 / 170663 0 / 159917 1 / 159059
lymph node 2 / 62650 1 / 27007     2 / 62650 1 / 27007 0 / 5278419 0 / 4863489
lymphoreticular   2 / 44303 -- -- 0 / 17836 2 / 44303 -- --
mammary gland 15 / 46553 10 / 104307 2703 / 43166038 247 / 30312656 15 / 46553 10 / 104307 2703 / 43166038 247 / 30312656
muscle   1 / 27691   2 / 61270 0 / 74039 1 / 27691 0 / 107836 2 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 2 / 89988   1 / 179472 1 / 11462 2 / 89988 0 / 94887 1 / 179472
pancreas   5 / 74930 2 / 85728 5 / 189999 0 / 7237 5 / 74930 2 / 85728 5 / 189999
pancreatic islet 4 / 96524   -- -- 4 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 5 / 241088     -- 5 / 241088 0 / 39531 0 / 207348 --
pooled tissue 13 / 276455   -- -- 13 / 276455 0 / 0 -- --
prostate   6 / 107080     0 / 79993 6 / 107080 0 / 266949 0 / 491794
retina 1 / 29438 -- 6 / 820326   1 / 29438 -- 6 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin   5 / 125377 21 / 26905847 53 / 34522313 0 / 73633 5 / 125377 21 / 26905847 53 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 4 / 52939   -- -- 4 / 52939 0 / 5 -- --
stem cell -- -- 9 / 6230144 -- -- -- 9 / 6230144 --
stomach   2 / 65644   3 / 448716 0 / 26641 2 / 65644 0 / 124767 3 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 5 / 143630 1 / 100058 -- 9 / 12372003 5 / 143630 1 / 100058 -- 9 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   3 / 32606     0 / 11737 3 / 32606 0 / 115938 0 / 124664
uncharacterized tissue 16 / 207932 23 / 479819     16 / 207932 23 / 479819 0 / 21833 0 / 51729
uterus 2 / 38063 8 / 133582 45 / 10193077 -- 2 / 38063 8 / 133582 45 / 10193077 --
vascular 2 / 46250 -- 45 / 13135050 -- 2 / 46250 -- 45 / 13135050 --
white blood cells -- -- 40 / 846268 -- -- -- 40 / 846268 --
whole body -- -- -- -- -- -- -- --