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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.653202Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 206 / 3316537 284 / 2498449 1200 / 114162531 1690 / 109592465 206 / 3316537 284 / 2498449 1200 / 114162531 1690 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 1 / 57865 -- 6 / 83577 1 / 16077 1 / 57865 -- 6 / 83577
bone marrow     21 / 5047110 20 / 4978364 0 / 14774 0 / 29891 21 / 5047110 20 / 4978364
brain 18 / 506301 13 / 200215 41 / 729526 410 / 4997811 18 / 506301 13 / 200215 41 / 729526 410 / 4997811
cartilage   3 / 37226 -- 20 / 778035 0 / 15965 3 / 37226 -- 20 / 778035
cerebellum 4 / 90353   10 / 90885 145 / 1495938 4 / 90353 0 / 0 10 / 90885 145 / 1495938
cerebrum 5 / 198932   -- -- 5 / 198932 0 / 3422 -- --
cervix   3 / 44577 -- -- 0 / 3888 3 / 44577 -- --
colon 2 / 26551 15 / 151167 12 / 98089 48 / 643586 2 / 26551 15 / 151167 12 / 98089 48 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 33 / 246043   -- -- 33 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   5 / 17290 -- -- 0 / 270 5 / 17290 -- --
eye 16 / 128826 2 / 46440 6 / 85898 115 / 12434232 16 / 128826 2 / 46440 6 / 85898 115 / 12434232
gastrointestinal tract 2 / 28803   1 / 45908 -- 2 / 28803 0 / 12721 1 / 45908 --
heart 6 / 76442   2 / 83063 -- 6 / 76442 0 / 1 2 / 83063 --
kidney 3 / 106627 14 / 89898 4 / 155372 7 / 100281 3 / 106627 14 / 89898 4 / 155372 7 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846 12 / 107249 2 / 66308 3 / 214987 2 / 96846 12 / 107249 2 / 66308 3 / 214987
lung 10 / 128150 23 / 170663 21 / 159917 14 / 159059 10 / 128150 23 / 170663 21 / 159917 14 / 159059
lymph node 2 / 62650 4 / 27007 35 / 5278419 22 / 4863489 2 / 62650 4 / 27007 35 / 5278419 22 / 4863489
lymphoreticular 3 / 17836 5 / 44303 -- -- 3 / 17836 5 / 44303 -- --
mammary gland 2 / 46553 18 / 104307 188 / 43166038 297 / 30312656 2 / 46553 18 / 104307 188 / 43166038 297 / 30312656
muscle 1 / 74039 10 / 27691 4 / 107836 3 / 61270 1 / 74039 10 / 27691 4 / 107836 3 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 3 / 11462 12 / 89988 4 / 94887 23 / 179472 3 / 11462 12 / 89988 4 / 94887 23 / 179472
pancreas   12 / 74930 8 / 85728 18 / 189999 0 / 7237 12 / 74930 8 / 85728 18 / 189999
pancreatic islet   3 / 30072 -- -- 0 / 96524 3 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 2 / 13260   -- -- 2 / 13260 0 / 1358 -- --
placenta 21 / 241088 7 / 39531 5 / 207348 -- 21 / 241088 7 / 39531 5 / 207348 --
pooled tissue 24 / 276455   -- -- 24 / 276455 0 / 0 -- --
prostate 9 / 79993 12 / 107080 31 / 266949 76 / 491794 9 / 79993 12 / 107080 31 / 266949 76 / 491794
retina 1 / 29438 -- 31 / 820326   1 / 29438 -- 31 / 820326 0 / 88490
salivary gland   12 / 10368 -- -- 0 / 2490 12 / 10368 -- --
skin 4 / 73633 14 / 125377 331 / 26905847 268 / 34522313 4 / 73633 14 / 125377 331 / 26905847 268 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 2 / 52939   -- -- 2 / 52939 0 / 5 -- --
stem cell -- -- 91 / 6230144 -- -- -- 91 / 6230144 --
stomach 1 / 26641 9 / 65644 3 / 124767 16 / 448716 1 / 26641 9 / 65644 3 / 124767 16 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 6 / 143630 10 / 100058 -- 174 / 12372003 6 / 143630 10 / 100058 -- 174 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   4 / 32606 2 / 115938 3 / 124664 0 / 11737 4 / 32606 2 / 115938 3 / 124664
uncharacterized tissue 20 / 207932 44 / 479819 1 / 21833 2 / 51729 20 / 207932 44 / 479819 1 / 21833 2 / 51729
uterus 2 / 38063 16 / 133582 102 / 10193077 -- 2 / 38063 16 / 133582 102 / 10193077 --
vascular   -- 228 / 13135050 -- 0 / 46250 -- 228 / 13135050 --
white blood cells -- -- 16 / 846268 -- -- -- 16 / 846268 --
whole body -- -- -- -- -- -- -- --