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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.651228Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 83 / 3316537 58 / 2498449 4236 / 114162531 5537 / 109592465 83 / 3316537 58 / 2498449 4236 / 114162531 5537 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 1 / 57865 -- 1 / 83577 1 / 16077 1 / 57865 -- 1 / 83577
bone marrow   1 / 29891 52 / 5047110 61 / 4978364 0 / 14774 1 / 29891 52 / 5047110 61 / 4978364
brain 10 / 506301 7 / 200215 54 / 729526 308 / 4997811 10 / 506301 7 / 200215 54 / 729526 308 / 4997811
cartilage   3 / 37226 -- 26 / 778035 0 / 15965 3 / 37226 -- 26 / 778035
cerebellum 1 / 90353   2 / 90885 80 / 1495938 1 / 90353 0 / 0 2 / 90885 80 / 1495938
cerebrum 2 / 198932   -- -- 2 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon 5 / 26551 2 / 151167 3 / 98089 20 / 643586 5 / 26551 2 / 151167 3 / 98089 20 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 8 / 246043   -- -- 8 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 2 / 128826 1 / 46440   430 / 12434232 2 / 128826 1 / 46440 0 / 85898 430 / 12434232
gastrointestinal tract 2 / 28803 1 / 12721 1 / 45908 -- 2 / 28803 1 / 12721 1 / 45908 --
heart 3 / 76442   5 / 83063 -- 3 / 76442 0 / 1 5 / 83063 --
kidney 1 / 106627   11 / 155372 5 / 100281 1 / 106627 0 / 89898 11 / 155372 5 / 100281
limb -- -- -- -- -- -- -- --
liver 12 / 96846 1 / 107249 2 / 66308 12 / 214987 12 / 96846 1 / 107249 2 / 66308 12 / 214987
lung 1 / 128150 1 / 170663 10 / 159917 7 / 159059 1 / 128150 1 / 170663 10 / 159917 7 / 159059
lymph node 1 / 62650 2 / 27007 476 / 5278419 162 / 4863489 1 / 62650 2 / 27007 476 / 5278419 162 / 4863489
lymphoreticular 1 / 17836   -- -- 1 / 17836 0 / 44303 -- --
mammary gland   4 / 104307 574 / 43166038 1957 / 30312656 0 / 46553 4 / 104307 574 / 43166038 1957 / 30312656
muscle 1 / 74039   4 / 107836 1 / 61270 1 / 74039 0 / 27691 4 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   2 / 89988 3 / 94887 6 / 179472 0 / 11462 2 / 89988 3 / 94887 6 / 179472
pancreas   3 / 74930 1 / 85728 14 / 189999 0 / 7237 3 / 74930 1 / 85728 14 / 189999
pancreatic islet 2 / 96524 2 / 30072 -- -- 2 / 96524 2 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 1 / 241088 1 / 39531 13 / 207348 -- 1 / 241088 1 / 39531 13 / 207348 --
pooled tissue 2 / 276455   -- -- 2 / 276455 0 / 0 -- --
prostate 2 / 79993   14 / 266949 30 / 491794 2 / 79993 0 / 107080 14 / 266949 30 / 491794
retina   -- 86 / 820326 3 / 88490 0 / 29438 -- 86 / 820326 3 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 4 / 73633 4 / 125377 1177 / 26905847 1214 / 34522313 4 / 73633 4 / 125377 1177 / 26905847 1214 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 3 / 52939   -- -- 3 / 52939 0 / 5 -- --
stem cell -- -- 247 / 6230144 -- -- -- 247 / 6230144 --
stomach   1 / 65644 7 / 124767 36 / 448716 0 / 26641 1 / 65644 7 / 124767 36 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 4 / 143630   -- 1148 / 12372003 4 / 143630 0 / 100058 -- 1148 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid     1 / 115938 13 / 124664 0 / 11737 0 / 32606 1 / 115938 13 / 124664
uncharacterized tissue 9 / 207932 14 / 479819   3 / 51729 9 / 207932 14 / 479819 0 / 21833 3 / 51729
uterus   7 / 133582 672 / 10193077 -- 0 / 38063 7 / 133582 672 / 10193077 --
vascular   -- 752 / 13135050 -- 0 / 46250 -- 752 / 13135050 --
white blood cells -- -- 69 / 846268 -- -- -- 69 / 846268 --
whole body -- -- -- -- -- -- -- --