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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.646051Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 121 / 3316537 72 / 2498449 695 / 114162531 1117 / 109592465 121 / 3316537 72 / 2498449 695 / 114162531 1117 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone     --   0 / 16077 0 / 57865 -- 0 / 83577
bone marrow     4 / 5047110 2 / 4978364 0 / 14774 0 / 29891 4 / 5047110 2 / 4978364
brain 27 / 506301 3 / 200215 3 / 729526 59 / 4997811 27 / 506301 3 / 200215 3 / 729526 59 / 4997811
cartilage   1 / 37226 -- 6 / 778035 0 / 15965 1 / 37226 -- 6 / 778035
cerebellum 1 / 90353     24 / 1495938 1 / 90353 0 / 0 0 / 90885 24 / 1495938
cerebrum 8 / 198932   -- -- 8 / 198932 0 / 3422 -- --
cervix   4 / 44577 -- -- 0 / 3888 4 / 44577 -- --
colon   4 / 151167   3 / 643586 0 / 26551 4 / 151167 0 / 98089 3 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 9 / 246043   -- -- 9 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 6 / 128826   1 / 85898 125 / 12434232 6 / 128826 0 / 46440 1 / 85898 125 / 12434232
gastrointestinal tract 1 / 28803     -- 1 / 28803 0 / 12721 0 / 45908 --
heart 1 / 76442     -- 1 / 76442 0 / 1 0 / 83063 --
kidney 3 / 106627 1 / 89898 1 / 155372   3 / 106627 1 / 89898 1 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 3 / 96846 4 / 107249     3 / 96846 4 / 107249 0 / 66308 0 / 214987
lung 1 / 128150 11 / 170663 2 / 159917   1 / 128150 11 / 170663 2 / 159917 0 / 159059
lymph node 4 / 62650   89 / 5278419 33 / 4863489 4 / 62650 0 / 27007 89 / 5278419 33 / 4863489
lymphoreticular 1 / 17836   -- -- 1 / 17836 0 / 44303 -- --
mammary gland 3 / 46553 1 / 104307 32 / 43166038 492 / 30312656 3 / 46553 1 / 104307 32 / 43166038 492 / 30312656
muscle 5 / 74039     1 / 61270 5 / 74039 0 / 27691 0 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   4 / 89988   3 / 179472 0 / 11462 4 / 89988 0 / 94887 3 / 179472
pancreas   1 / 74930 1 / 85728 3 / 189999 0 / 7237 1 / 74930 1 / 85728 3 / 189999
pancreatic islet 2 / 96524 2 / 30072 -- -- 2 / 96524 2 / 30072 -- --
parathyroid   3 / 20557 -- -- 0 / 24 3 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 9 / 241088 1 / 39531   -- 9 / 241088 1 / 39531 0 / 207348 --
pooled tissue 11 / 276455   -- -- 11 / 276455 0 / 0 -- --
prostate 5 / 79993 3 / 107080   3 / 491794 5 / 79993 3 / 107080 0 / 266949 3 / 491794
retina 2 / 29438 -- 8 / 820326 8 / 88490 2 / 29438 -- 8 / 820326 8 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 1 / 73633 4 / 125377 171 / 26905847 250 / 34522313 1 / 73633 4 / 125377 171 / 26905847 250 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 4 / 52939   -- -- 4 / 52939 0 / 5 -- --
stem cell -- -- 73 / 6230144 -- -- -- 73 / 6230144 --
stomach 1 / 26641   1 / 124767 4 / 448716 1 / 26641 0 / 65644 1 / 124767 4 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 3 / 143630 7 / 100058 -- 100 / 12372003 3 / 143630 7 / 100058 -- 100 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 1 / 11737   3 / 115938 1 / 124664 1 / 11737 0 / 32606 3 / 115938 1 / 124664
uncharacterized tissue 4 / 207932 15 / 479819     4 / 207932 15 / 479819 0 / 21833 0 / 51729
uterus 1 / 38063 2 / 133582 134 / 10193077 -- 1 / 38063 2 / 133582 134 / 10193077 --
vascular 2 / 46250 -- 154 / 13135050 -- 2 / 46250 -- 154 / 13135050 --
white blood cells -- -- 18 / 846268 -- -- -- 18 / 846268 --
whole body -- -- -- -- -- -- -- --