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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.645337Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 120 / 3316537 91 / 2498449 7495 / 114162531 10580 / 109592465 120 / 3316537 91 / 2498449 7495 / 114162531 10580 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   3 / 57865 --   0 / 16077 3 / 57865 -- 0 / 83577
bone marrow   1 / 29891 69 / 5047110 30 / 4978364 0 / 14774 1 / 29891 69 / 5047110 30 / 4978364
brain 21 / 506301 6 / 200215 17 / 729526 246 / 4997811 21 / 506301 6 / 200215 17 / 729526 246 / 4997811
cartilage     -- 8 / 778035 0 / 15965 0 / 37226 -- 8 / 778035
cerebellum     6 / 90885 142 / 1495938 0 / 90353 0 / 0 6 / 90885 142 / 1495938
cerebrum 3 / 198932   -- -- 3 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon   3 / 151167   3 / 643586 0 / 26551 3 / 151167 0 / 98089 3 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 9 / 246043   -- -- 9 / 246043 0 / 38 -- --
endocrine 4 / 19564 1 / 2857 -- -- 4 / 19564 1 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 7 / 128826 3 / 46440 2 / 85898 3232 / 12434232 7 / 128826 3 / 46440 2 / 85898 3232 / 12434232
gastrointestinal tract 1 / 28803 1 / 12721 2 / 45908 -- 1 / 28803 1 / 12721 2 / 45908 --
heart 3 / 76442   3 / 83063 -- 3 / 76442 0 / 1 3 / 83063 --
kidney 5 / 106627 5 / 89898 7 / 155372 2 / 100281 5 / 106627 5 / 89898 7 / 155372 2 / 100281
limb -- -- -- -- -- -- -- --
liver 5 / 96846 2 / 107249 2 / 66308 4 / 214987 5 / 96846 2 / 107249 2 / 66308 4 / 214987
lung 7 / 128150   4 / 159917 1 / 159059 7 / 128150 0 / 170663 4 / 159917 1 / 159059
lymph node 4 / 62650 1 / 27007 622 / 5278419 266 / 4863489 4 / 62650 1 / 27007 622 / 5278419 266 / 4863489
lymphoreticular 1 / 17836 1 / 44303 -- -- 1 / 17836 1 / 44303 -- --
mammary gland   1 / 104307 70 / 43166038 1743 / 30312656 0 / 46553 1 / 104307 70 / 43166038 1743 / 30312656
muscle 4 / 74039     1 / 61270 4 / 74039 0 / 27691 0 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462   2 / 94887 2 / 179472 1 / 11462 0 / 89988 2 / 94887 2 / 179472
pancreas 1 / 7237 4 / 74930   3 / 189999 1 / 7237 4 / 74930 0 / 85728 3 / 189999
pancreatic islet 1 / 96524 1 / 30072 -- -- 1 / 96524 1 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 3 / 241088 5 / 39531 10 / 207348 -- 3 / 241088 5 / 39531 10 / 207348 --
pooled tissue 14 / 276455   -- -- 14 / 276455 0 / 0 -- --
prostate 2 / 79993 4 / 107080 12 / 266949 14 / 491794 2 / 79993 4 / 107080 12 / 266949 14 / 491794
retina 1 / 29438 -- 70 / 820326 16 / 88490 1 / 29438 -- 70 / 820326 16 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 3 / 73633 7 / 125377 4381 / 26905847 4158 / 34522313 3 / 73633 7 / 125377 4381 / 26905847 4158 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 517 / 6230144 -- -- -- 517 / 6230144 --
stomach 1 / 26641 6 / 65644 1 / 124767 7 / 448716 1 / 26641 6 / 65644 1 / 124767 7 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 4 / 143630 2 / 100058 -- 682 / 12372003 4 / 143630 2 / 100058 -- 682 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid   3 / 32606 13 / 115938 17 / 124664 0 / 11737 3 / 32606 13 / 115938 17 / 124664
uncharacterized tissue 8 / 207932 25 / 479819   3 / 51729 8 / 207932 25 / 479819 0 / 21833 3 / 51729
uterus 3 / 38063 6 / 133582 460 / 10193077 -- 3 / 38063 6 / 133582 460 / 10193077 --
vascular 1 / 46250 -- 1217 / 13135050 -- 1 / 46250 -- 1217 / 13135050 --
white blood cells -- -- 8 / 846268 -- -- -- 8 / 846268 --
whole body -- -- -- -- -- -- -- --