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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.644056Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 275 / 3316537 215 / 2498449 2631 / 114162531 5884 / 109592465 275 / 3316537 215 / 2498449 2631 / 114162531 5884 / 109592465
adrenal cortex -- 2 / 9928 -- -- -- 2 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   9 / 57865 -- 2 / 83577 0 / 16077 9 / 57865 -- 2 / 83577
bone marrow   1 / 29891 31 / 5047110 99 / 4978364 0 / 14774 1 / 29891 31 / 5047110 99 / 4978364
brain 73 / 506301 13 / 200215 9 / 729526 91 / 4997811 73 / 506301 13 / 200215 9 / 729526 91 / 4997811
cartilage 3 / 15965 3 / 37226 -- 19 / 778035 3 / 15965 3 / 37226 -- 19 / 778035
cerebellum 11 / 90353   1 / 90885 28 / 1495938 11 / 90353 0 / 0 1 / 90885 28 / 1495938
cerebrum 28 / 198932 1 / 3422 -- -- 28 / 198932 1 / 3422 -- --
cervix   2 / 44577 -- -- 0 / 3888 2 / 44577 -- --
colon 2 / 26551 8 / 151167 3 / 98089 16 / 643586 2 / 26551 8 / 151167 3 / 98089 16 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 16 / 246043   -- -- 16 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   4 / 17290 -- -- 0 / 270 4 / 17290 -- --
eye 6 / 128826 4 / 46440 2 / 85898 1880 / 12434232 6 / 128826 4 / 46440 2 / 85898 1880 / 12434232
gastrointestinal tract 1 / 28803 1 / 12721   -- 1 / 28803 1 / 12721 0 / 45908 --
heart 3 / 76442     -- 3 / 76442 0 / 1 0 / 83063 --
kidney 14 / 106627 8 / 89898 1 / 155372 1 / 100281 14 / 106627 8 / 89898 1 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846 10 / 107249 1 / 66308   2 / 96846 10 / 107249 1 / 66308 0 / 214987
lung 7 / 128150 11 / 170663 3 / 159917 4 / 159059 7 / 128150 11 / 170663 3 / 159917 4 / 159059
lymph node 7 / 62650 2 / 27007 41 / 5278419 20 / 4863489 7 / 62650 2 / 27007 41 / 5278419 20 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland 1 / 46553 8 / 104307 153 / 43166038 1019 / 30312656 1 / 46553 8 / 104307 153 / 43166038 1019 / 30312656
muscle 10 / 74039 4 / 27691     10 / 74039 4 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   9 / 89988 5 / 94887 10 / 179472 0 / 11462 9 / 89988 5 / 94887 10 / 179472
pancreas   1 / 74930 5 / 85728 8 / 189999 0 / 7237 1 / 74930 5 / 85728 8 / 189999
pancreatic islet 2 / 96524   -- -- 2 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland 2 / 6170 -- -- -- 2 / 6170 -- -- --
pituitary gland 2 / 13260   -- -- 2 / 13260 0 / 1358 -- --
placenta 5 / 241088 1 / 39531   -- 5 / 241088 1 / 39531 0 / 207348 --
pooled tissue 22 / 276455   -- -- 22 / 276455 0 / 0 -- --
prostate 5 / 79993 2 / 107080 2 / 266949 13 / 491794 5 / 79993 2 / 107080 2 / 266949 13 / 491794
retina 2 / 29438 -- 7 / 820326   2 / 29438 -- 7 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 6 / 73633 3 / 125377 1140 / 26905847 1917 / 34522313 6 / 73633 3 / 125377 1140 / 26905847 1917 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 2 / 52939   -- -- 2 / 52939 0 / 5 -- --
stem cell -- -- 425 / 6230144 -- -- -- 425 / 6230144 --
stomach 3 / 26641 4 / 65644 1 / 124767 5 / 448716 3 / 26641 4 / 65644 1 / 124767 5 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 13 / 143630 37 / 100058 -- 749 / 12372003 13 / 143630 37 / 100058 -- 749 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid   1 / 32606 1 / 115938 2 / 124664 0 / 11737 1 / 32606 1 / 115938 2 / 124664
uncharacterized tissue 18 / 207932 58 / 479819   1 / 51729 18 / 207932 58 / 479819 0 / 21833 1 / 51729
uterus 1 / 38063 7 / 133582 140 / 10193077 -- 1 / 38063 7 / 133582 140 / 10193077 --
vascular 6 / 46250 -- 653 / 13135050 -- 6 / 46250 -- 653 / 13135050 --
white blood cells -- -- 7 / 846268 -- -- -- 7 / 846268 --
whole body -- -- -- -- -- -- -- --