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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.644004Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 110 / 3316537 45 / 2498449 1998 / 114162531 3502 / 109592465 110 / 3316537 45 / 2498449 1998 / 114162531 3502 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 2 / 57865 --   1 / 16077 2 / 57865 -- 0 / 83577
bone marrow 1 / 14774 1 / 29891 1 / 5047110 75 / 4978364 1 / 14774 1 / 29891 1 / 5047110 75 / 4978364
brain 14 / 506301 2 / 200215 12 / 729526 96 / 4997811 14 / 506301 2 / 200215 12 / 729526 96 / 4997811
cartilage     -- 2 / 778035 0 / 15965 0 / 37226 -- 2 / 778035
cerebellum     1 / 90885 42 / 1495938 0 / 90353 0 / 0 1 / 90885 42 / 1495938
cerebrum 3 / 198932   -- -- 3 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon   7 / 151167   1 / 643586 0 / 26551 7 / 151167 0 / 98089 1 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 17 / 246043   -- -- 17 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 4 / 128826 1 / 46440 1 / 85898 963 / 12434232 4 / 128826 1 / 46440 1 / 85898 963 / 12434232
gastrointestinal tract   1 / 12721 1 / 45908 -- 0 / 28803 1 / 12721 1 / 45908 --
heart       -- 0 / 76442 0 / 1 0 / 83063 --
kidney 2 / 106627   1 / 155372   2 / 106627 0 / 89898 1 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 7 / 96846 6 / 107249   1 / 214987 7 / 96846 6 / 107249 0 / 66308 1 / 214987
lung 4 / 128150 3 / 170663   2 / 159059 4 / 128150 3 / 170663 0 / 159917 2 / 159059
lymph node 6 / 62650   115 / 5278419 64 / 4863489 6 / 62650 0 / 27007 115 / 5278419 64 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland 1 / 46553 1 / 104307 105 / 43166038 661 / 30312656 1 / 46553 1 / 104307 105 / 43166038 661 / 30312656
muscle 4 / 74039 1 / 27691   1 / 61270 4 / 74039 1 / 27691 0 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   4 / 89988   1 / 179472 0 / 11462 4 / 89988 0 / 94887 1 / 179472
pancreas       1 / 189999 0 / 7237 0 / 74930 0 / 85728 1 / 189999
pancreatic islet 5 / 96524   -- -- 5 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 6 / 241088   5 / 207348 -- 6 / 241088 0 / 39531 5 / 207348 --
pooled tissue 12 / 276455   -- -- 12 / 276455 0 / 0 -- --
prostate 1 / 79993 1 / 107080   3 / 491794 1 / 79993 1 / 107080 0 / 266949 3 / 491794
retina 1 / 29438 -- 9 / 820326 6 / 88490 1 / 29438 -- 9 / 820326 6 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin   2 / 125377 678 / 26905847 678 / 34522313 0 / 73633 2 / 125377 678 / 26905847 678 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 265 / 6230144 -- -- -- 265 / 6230144 --
stomach 1 / 26641   3 / 124767 5 / 448716 1 / 26641 0 / 65644 3 / 124767 5 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 14 / 143630 1 / 100058 -- 898 / 12372003 14 / 143630 1 / 100058 -- 898 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     3 / 115938 1 / 124664 0 / 11737 0 / 32606 3 / 115938 1 / 124664
uncharacterized tissue 1 / 207932 9 / 479819   1 / 51729 1 / 207932 9 / 479819 0 / 21833 1 / 51729
uterus   1 / 133582 497 / 10193077 -- 0 / 38063 1 / 133582 497 / 10193077 --
vascular 1 / 46250 -- 300 / 13135050 -- 1 / 46250 -- 300 / 13135050 --
white blood cells -- -- 1 / 846268 -- -- -- 1 / 846268 --
whole body -- -- -- -- -- -- -- --