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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.643498Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 226 / 3316537 262 / 2498449 4879 / 114162531 8148 / 109592465 226 / 3316537 262 / 2498449 4879 / 114162531 8148 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 3 / 16077 5 / 57865 --   3 / 16077 5 / 57865 -- 0 / 83577
bone marrow     103 / 5047110 36 / 4978364 0 / 14774 0 / 29891 103 / 5047110 36 / 4978364
brain 29 / 506301 19 / 200215 66 / 729526 337 / 4997811 29 / 506301 19 / 200215 66 / 729526 337 / 4997811
cartilage   5 / 37226 -- 21 / 778035 0 / 15965 5 / 37226 -- 21 / 778035
cerebellum 12 / 90353   11 / 90885 64 / 1495938 12 / 90353 0 / 0 11 / 90885 64 / 1495938
cerebrum 17 / 198932   -- -- 17 / 198932 0 / 3422 -- --
cervix   9 / 44577 -- -- 0 / 3888 9 / 44577 -- --
colon 1 / 26551 11 / 151167 5 / 98089 16 / 643586 1 / 26551 11 / 151167 5 / 98089 16 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 17 / 246043   -- -- 17 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 32 / 128826 8 / 46440 2 / 85898 997 / 12434232 32 / 128826 8 / 46440 2 / 85898 997 / 12434232
gastrointestinal tract   3 / 12721   -- 0 / 28803 3 / 12721 0 / 45908 --
heart 3 / 76442   1 / 83063 -- 3 / 76442 0 / 1 1 / 83063 --
kidney 5 / 106627 16 / 89898 9 / 155372 14 / 100281 5 / 106627 16 / 89898 9 / 155372 14 / 100281
limb -- -- -- -- -- -- -- --
liver 3 / 96846 13 / 107249 5 / 66308 17 / 214987 3 / 96846 13 / 107249 5 / 66308 17 / 214987
lung 6 / 128150 18 / 170663 13 / 159917 12 / 159059 6 / 128150 18 / 170663 13 / 159917 12 / 159059
lymph node 14 / 62650 1 / 27007 317 / 5278419 43 / 4863489 14 / 62650 1 / 27007 317 / 5278419 43 / 4863489
lymphoreticular 3 / 17836 3 / 44303 -- -- 3 / 17836 3 / 44303 -- --
mammary gland 3 / 46553 10 / 104307 1414 / 43166038 1879 / 30312656 3 / 46553 10 / 104307 1414 / 43166038 1879 / 30312656
muscle 7 / 74039 2 / 27691 21 / 107836 2 / 61270 7 / 74039 2 / 27691 21 / 107836 2 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary 1 / 11462 7 / 89988 4 / 94887 4 / 179472 1 / 11462 7 / 89988 4 / 94887 4 / 179472
pancreas   10 / 74930 3 / 85728 15 / 189999 0 / 7237 10 / 74930 3 / 85728 15 / 189999
pancreatic islet 4 / 96524   -- -- 4 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 2 / 14891   -- -- 2 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 4 / 241088 12 / 39531 14 / 207348 -- 4 / 241088 12 / 39531 14 / 207348 --
pooled tissue 12 / 276455   -- -- 12 / 276455 0 / 0 -- --
prostate 3 / 79993 2 / 107080 8 / 266949 15 / 491794 3 / 79993 2 / 107080 8 / 266949 15 / 491794
retina 1 / 29438 -- 116 / 820326 6 / 88490 1 / 29438 -- 116 / 820326 6 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 7 / 73633 26 / 125377 1215 / 26905847 3706 / 34522313 7 / 73633 26 / 125377 1215 / 26905847 3706 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 249 / 6230144 -- -- -- 249 / 6230144 --
stomach   2 / 65644 11 / 124767 43 / 448716 0 / 26641 2 / 65644 11 / 124767 43 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 12 / 143630 13 / 100058 -- 909 / 12372003 12 / 143630 13 / 100058 -- 909 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 2 / 11737 1 / 32606 9 / 115938 6 / 124664 2 / 11737 1 / 32606 9 / 115938 6 / 124664
uncharacterized tissue 12 / 207932 40 / 479819 3 / 21833 6 / 51729 12 / 207932 40 / 479819 3 / 21833 6 / 51729
uterus 5 / 38063 26 / 133582 735 / 10193077 -- 5 / 38063 26 / 133582 735 / 10193077 --
vascular 1 / 46250 -- 533 / 13135050 -- 1 / 46250 -- 533 / 13135050 --
white blood cells -- -- 12 / 846268 -- -- -- 12 / 846268 --
whole body -- -- -- -- -- -- -- --