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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.643452Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 122 / 3316537 138 / 2498449 4253 / 114162531 1140 / 109592465 122 / 3316537 138 / 2498449 4253 / 114162531 1140 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 1 / 57865 -- 3 / 83577 1 / 16077 1 / 57865 -- 3 / 83577
bone marrow   1 / 29891 4 / 5047110 2 / 4978364 0 / 14774 1 / 29891 4 / 5047110 2 / 4978364
brain 24 / 506301 7 / 200215 29 / 729526 75 / 4997811 24 / 506301 7 / 200215 29 / 729526 75 / 4997811
cartilage   1 / 37226 -- 13 / 778035 0 / 15965 1 / 37226 -- 13 / 778035
cerebellum 2 / 90353   4 / 90885 32 / 1495938 2 / 90353 0 / 0 4 / 90885 32 / 1495938
cerebrum 10 / 198932   -- -- 10 / 198932 0 / 3422 -- --
cervix   2 / 44577 -- -- 0 / 3888 2 / 44577 -- --
colon 1 / 26551 3 / 151167 2 / 98089 9 / 643586 1 / 26551 3 / 151167 2 / 98089 9 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 11 / 246043   -- -- 11 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye 5 / 128826 3 / 46440 1 / 85898 320 / 12434232 5 / 128826 3 / 46440 1 / 85898 320 / 12434232
gastrointestinal tract   1 / 12721   -- 0 / 28803 1 / 12721 0 / 45908 --
heart       -- 0 / 76442 0 / 1 0 / 83063 --
kidney 3 / 106627 1 / 89898 7 / 155372 2 / 100281 3 / 106627 1 / 89898 7 / 155372 2 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 2 / 107249 1 / 66308 1 / 214987 1 / 96846 2 / 107249 1 / 66308 1 / 214987
lung 7 / 128150 2 / 170663   1 / 159059 7 / 128150 2 / 170663 0 / 159917 1 / 159059
lymph node 6 / 62650 1 / 27007 50 / 5278419 6 / 4863489 6 / 62650 1 / 27007 50 / 5278419 6 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 3 / 46553 1 / 104307 3438 / 43166038 189 / 30312656 3 / 46553 1 / 104307 3438 / 43166038 189 / 30312656
muscle   1 / 27691 1 / 107836 1 / 61270 0 / 74039 1 / 27691 1 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   1 / 89988     0 / 11462 1 / 89988 0 / 94887 0 / 179472
pancreas       1 / 189999 0 / 7237 0 / 74930 0 / 85728 1 / 189999
pancreatic islet 4 / 96524   -- -- 4 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 6 / 241088   5 / 207348 -- 6 / 241088 0 / 39531 5 / 207348 --
pooled tissue 15 / 276455   -- -- 15 / 276455 0 / 0 -- --
prostate 3 / 79993 2 / 107080 2 / 266949 6 / 491794 3 / 79993 2 / 107080 2 / 266949 6 / 491794
retina   -- 22 / 820326 7 / 88490 0 / 29438 -- 22 / 820326 7 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 5 / 73633 3 / 125377 340 / 26905847 379 / 34522313 5 / 73633 3 / 125377 340 / 26905847 379 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 80 / 6230144 -- -- -- 80 / 6230144 --
stomach 1 / 26641 11 / 65644 2 / 124767 7 / 448716 1 / 26641 11 / 65644 2 / 124767 7 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 8 / 143630 5 / 100058 -- 86 / 12372003 8 / 143630 5 / 100058 -- 86 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   3 / 32606 1 / 115938   0 / 11737 3 / 32606 1 / 115938 0 / 124664
uncharacterized tissue 3 / 207932 82 / 479819 1 / 21833   3 / 207932 82 / 479819 1 / 21833 0 / 51729
uterus   2 / 133582 149 / 10193077 -- 0 / 38063 2 / 133582 149 / 10193077 --
vascular   -- 98 / 13135050 -- 0 / 46250 -- 98 / 13135050 --
white blood cells -- -- 16 / 846268 -- -- -- 16 / 846268 --
whole body -- -- -- -- -- -- -- --