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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.6421Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 105 / 3316537 81 / 2498449 1918 / 114162531 2711 / 109592465 105 / 3316537 81 / 2498449 1918 / 114162531 2711 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 1 / 57865 --   1 / 16077 1 / 57865 -- 0 / 83577
bone marrow     29 / 5047110 72 / 4978364 0 / 14774 0 / 29891 29 / 5047110 72 / 4978364
brain 40 / 506301 4 / 200215 6 / 729526 105 / 4997811 40 / 506301 4 / 200215 6 / 729526 105 / 4997811
cartilage     -- 7 / 778035 0 / 15965 0 / 37226 -- 7 / 778035
cerebellum 2 / 90353   2 / 90885 40 / 1495938 2 / 90353 0 / 0 2 / 90885 40 / 1495938
cerebrum 5 / 198932 1 / 3422 -- -- 5 / 198932 1 / 3422 -- --
cervix   1 / 44577 -- -- 0 / 3888 1 / 44577 -- --
colon   2 / 151167   4 / 643586 0 / 26551 2 / 151167 0 / 98089 4 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 12 / 246043   -- -- 12 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 6 / 128826 8 / 46440 2 / 85898 568 / 12434232 6 / 128826 8 / 46440 2 / 85898 568 / 12434232
gastrointestinal tract 1 / 28803     -- 1 / 28803 0 / 12721 0 / 45908 --
heart 1 / 76442     -- 1 / 76442 0 / 1 0 / 83063 --
kidney   1 / 89898 6 / 155372 2 / 100281 0 / 106627 1 / 89898 6 / 155372 2 / 100281
limb -- -- -- -- -- -- -- --
liver   2 / 107249 1 / 66308 2 / 214987 0 / 96846 2 / 107249 1 / 66308 2 / 214987
lung 1 / 128150 8 / 170663 1 / 159917 2 / 159059 1 / 128150 8 / 170663 1 / 159917 2 / 159059
lymph node     103 / 5278419 223 / 4863489 0 / 62650 0 / 27007 103 / 5278419 223 / 4863489
lymphoreticular   2 / 44303 -- -- 0 / 17836 2 / 44303 -- --
mammary gland   4 / 104307 76 / 43166038 418 / 30312656 0 / 46553 4 / 104307 76 / 43166038 418 / 30312656
muscle 1 / 74039 2 / 27691   2 / 61270 1 / 74039 2 / 27691 0 / 107836 2 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary   1 / 89988 4 / 94887   0 / 11462 1 / 89988 4 / 94887 0 / 179472
pancreas     1 / 85728 1 / 189999 0 / 7237 0 / 74930 1 / 85728 1 / 189999
pancreatic islet 3 / 96524   -- -- 3 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 4 / 241088   2 / 207348 -- 4 / 241088 0 / 39531 2 / 207348 --
pooled tissue 4 / 276455   -- -- 4 / 276455 0 / 0 -- --
prostate 5 / 79993   8 / 266949 13 / 491794 5 / 79993 0 / 107080 8 / 266949 13 / 491794
retina 1 / 29438 -- 31 / 820326 2 / 88490 1 / 29438 -- 31 / 820326 2 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 1 / 73633 4 / 125377 844 / 26905847 1019 / 34522313 1 / 73633 4 / 125377 844 / 26905847 1019 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 66 / 6230144 -- -- -- 66 / 6230144 --
stomach   2 / 65644 4 / 124767 6 / 448716 0 / 26641 2 / 65644 4 / 124767 6 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 12 / 143630 6 / 100058 -- 221 / 12372003 12 / 143630 6 / 100058 -- 221 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606 6 / 115938 4 / 124664 0 / 11737 1 / 32606 6 / 115938 4 / 124664
uncharacterized tissue 2 / 207932 26 / 479819 1 / 21833   2 / 207932 26 / 479819 1 / 21833 0 / 51729
uterus   5 / 133582 355 / 10193077 -- 0 / 38063 5 / 133582 355 / 10193077 --
vascular   -- 348 / 13135050 -- 0 / 46250 -- 348 / 13135050 --
white blood cells -- -- 22 / 846268 -- -- -- 22 / 846268 --
whole body -- -- -- -- -- -- -- --