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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.631672Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 260 / 3316537 196 / 2498449 2669 / 114162531 1085 / 109592465 260 / 3316537 196 / 2498449 2669 / 114162531 1085 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077   -- 2 / 83577 1 / 16077 0 / 57865 -- 2 / 83577
bone marrow 1 / 14774 1 / 29891 4 / 5047110 147 / 4978364 1 / 14774 1 / 29891 4 / 5047110 147 / 4978364
brain 34 / 506301 13 / 200215 9 / 729526 126 / 4997811 34 / 506301 13 / 200215 9 / 729526 126 / 4997811
cartilage   3 / 37226 -- 23 / 778035 0 / 15965 3 / 37226 -- 23 / 778035
cerebellum 3 / 90353   2 / 90885 27 / 1495938 3 / 90353 0 / 0 2 / 90885 27 / 1495938
cerebrum 13 / 198932 1 / 3422 -- -- 13 / 198932 1 / 3422 -- --
cervix   5 / 44577 -- -- 0 / 3888 5 / 44577 -- --
colon 3 / 26551 13 / 151167 1 / 98089 6 / 643586 3 / 26551 13 / 151167 1 / 98089 6 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 19 / 246043   -- -- 19 / 246043 0 / 38 -- --
endocrine   1 / 2857 -- -- 0 / 19564 1 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 21 / 128826 3 / 46440 3 / 85898 92 / 12434232 21 / 128826 3 / 46440 3 / 85898 92 / 12434232
gastrointestinal tract 3 / 28803 1 / 12721 1 / 45908 -- 3 / 28803 1 / 12721 1 / 45908 --
heart 10 / 76442     -- 10 / 76442 0 / 1 0 / 83063 --
kidney 9 / 106627 6 / 89898 3 / 155372 1 / 100281 9 / 106627 6 / 89898 3 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver 4 / 96846 1 / 107249   4 / 214987 4 / 96846 1 / 107249 0 / 66308 4 / 214987
lung 7 / 128150 19 / 170663 2 / 159917 4 / 159059 7 / 128150 19 / 170663 2 / 159917 4 / 159059
lymph node 4 / 62650 3 / 27007 32 / 5278419 2 / 4863489 4 / 62650 3 / 27007 32 / 5278419 2 / 4863489
lymphoreticular   5 / 44303 -- -- 0 / 17836 5 / 44303 -- --
mammary gland 6 / 46553 10 / 104307 2296 / 43166038 250 / 30312656 6 / 46553 10 / 104307 2296 / 43166038 250 / 30312656
muscle 8 / 74039   1 / 107836 1 / 61270 8 / 74039 0 / 27691 1 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 2 / 11462 4 / 89988 3 / 94887 1 / 179472 2 / 11462 4 / 89988 3 / 94887 1 / 179472
pancreas 1 / 7237 6 / 74930 2 / 85728 2 / 189999 1 / 7237 6 / 74930 2 / 85728 2 / 189999
pancreatic islet 4 / 96524   -- -- 4 / 96524 0 / 30072 -- --
parathyroid   2 / 20557 -- -- 0 / 24 2 / 20557 -- --
peripheral nervous system 2 / 14891   -- -- 2 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 26 / 241088 3 / 39531 3 / 207348 -- 26 / 241088 3 / 39531 3 / 207348 --
pooled tissue 30 / 276455   -- -- 30 / 276455 0 / 0 -- --
prostate 7 / 79993 6 / 107080 5 / 266949 4 / 491794 7 / 79993 6 / 107080 5 / 266949 4 / 491794
retina 4 / 29438 -- 48 / 820326   4 / 29438 -- 48 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 11 / 73633 19 / 125377 61 / 26905847 304 / 34522313 11 / 73633 19 / 125377 61 / 26905847 304 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 3 / 52939   -- -- 3 / 52939 0 / 5 -- --
stem cell -- -- 53 / 6230144 -- -- -- 53 / 6230144 --
stomach   1 / 65644 2 / 124767 2 / 448716 0 / 26641 1 / 65644 2 / 124767 2 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 2 / 143630 10 / 100058 -- 86 / 12372003 2 / 143630 10 / 100058 -- 86 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid   1 / 32606     0 / 11737 1 / 32606 0 / 115938 0 / 124664
uncharacterized tissue 9 / 207932 49 / 479819   1 / 51729 9 / 207932 49 / 479819 0 / 21833 1 / 51729
uterus 3 / 38063 10 / 133582 65 / 10193077 -- 3 / 38063 10 / 133582 65 / 10193077 --
vascular 5 / 46250 -- 61 / 13135050 -- 5 / 46250 -- 61 / 13135050 --
white blood cells -- -- 12 / 846268 -- -- -- 12 / 846268 --
whole body -- -- -- -- -- -- -- --