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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.631629Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 126 / 3316537 147 / 2498449 655 / 114162531 1205 / 109592465 126 / 3316537 147 / 2498449 655 / 114162531 1205 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   6 / 57865 --   0 / 16077 6 / 57865 -- 0 / 83577
bone marrow   2 / 29891 3 / 5047110 5 / 4978364 0 / 14774 2 / 29891 3 / 5047110 5 / 4978364
brain 29 / 506301 12 / 200215 18 / 729526 130 / 4997811 29 / 506301 12 / 200215 18 / 729526 130 / 4997811
cartilage     -- 1 / 778035 0 / 15965 0 / 37226 -- 1 / 778035
cerebellum 2 / 90353   3 / 90885 60 / 1495938 2 / 90353 0 / 0 3 / 90885 60 / 1495938
cerebrum 2 / 198932   -- -- 2 / 198932 0 / 3422 -- --
cervix 1 / 3888 20 / 44577 -- -- 1 / 3888 20 / 44577 -- --
colon   6 / 151167 1 / 98089 18 / 643586 0 / 26551 6 / 151167 1 / 98089 18 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 7 / 246043   -- -- 7 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   3 / 17290 -- -- 0 / 270 3 / 17290 -- --
eye 2 / 128826 2 / 46440 2 / 85898 15 / 12434232 2 / 128826 2 / 46440 2 / 85898 15 / 12434232
gastrointestinal tract 5 / 28803 2 / 12721 1 / 45908 -- 5 / 28803 2 / 12721 1 / 45908 --
heart 9 / 76442   2 / 83063 -- 9 / 76442 0 / 1 2 / 83063 --
kidney 4 / 106627 3 / 89898 6 / 155372 1 / 100281 4 / 106627 3 / 89898 6 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846 5 / 107249 4 / 66308 2 / 214987 2 / 96846 5 / 107249 4 / 66308 2 / 214987
lung 7 / 128150 6 / 170663 13 / 159917 4 / 159059 7 / 128150 6 / 170663 13 / 159917 4 / 159059
lymph node 2 / 62650   110 / 5278419 36 / 4863489 2 / 62650 0 / 27007 110 / 5278419 36 / 4863489
lymphoreticular 1 / 17836 6 / 44303 -- -- 1 / 17836 6 / 44303 -- --
mammary gland 1 / 46553 3 / 104307 36 / 43166038 519 / 30312656 1 / 46553 3 / 104307 36 / 43166038 519 / 30312656
muscle 5 / 74039   1 / 107836   5 / 74039 0 / 27691 1 / 107836 0 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary 1 / 11462 11 / 89988 7 / 94887 9 / 179472 1 / 11462 11 / 89988 7 / 94887 9 / 179472
pancreas   2 / 74930   10 / 189999 0 / 7237 2 / 74930 0 / 85728 10 / 189999
pancreatic islet 8 / 96524   -- -- 8 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 9 / 241088 2 / 39531 7 / 207348 -- 9 / 241088 2 / 39531 7 / 207348 --
pooled tissue 13 / 276455   -- -- 13 / 276455 0 / 0 -- --
prostate 3 / 79993   19 / 266949 25 / 491794 3 / 79993 0 / 107080 19 / 266949 25 / 491794
retina   -- 12 / 820326 1 / 88490 0 / 29438 -- 12 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin   2 / 125377 125 / 26905847 166 / 34522313 0 / 73633 2 / 125377 125 / 26905847 166 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 55 / 6230144 -- -- -- 55 / 6230144 --
stomach 1 / 26641   2 / 124767 14 / 448716 1 / 26641 0 / 65644 2 / 124767 14 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 2 / 143630 3 / 100058 -- 183 / 12372003 2 / 143630 3 / 100058 -- 183 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606 3 / 115938 2 / 124664 0 / 11737 1 / 32606 3 / 115938 2 / 124664
uncharacterized tissue 6 / 207932 45 / 479819 2 / 21833 4 / 51729 6 / 207932 45 / 479819 2 / 21833 4 / 51729
uterus 1 / 38063 4 / 133582 128 / 10193077 -- 1 / 38063 4 / 133582 128 / 10193077 --
vascular 1 / 46250 -- 87 / 13135050 -- 1 / 46250 -- 87 / 13135050 --
white blood cells -- -- 8 / 846268 -- -- -- 8 / 846268 --
whole body -- -- -- -- -- -- -- --