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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.631590Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 197 / 3316537 239 / 2498449 7196 / 114162531 1024 / 109592465 197 / 3316537 239 / 2498449 7196 / 114162531 1024 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 2 / 57865 -- 9 / 83577 1 / 16077 2 / 57865 -- 9 / 83577
bone marrow     16 / 5047110 2 / 4978364 0 / 14774 0 / 29891 16 / 5047110 2 / 4978364
brain 31 / 506301 21 / 200215 50 / 729526 165 / 4997811 31 / 506301 21 / 200215 50 / 729526 165 / 4997811
cartilage   3 / 37226 -- 47 / 778035 0 / 15965 3 / 37226 -- 47 / 778035
cerebellum 4 / 90353   2 / 90885 67 / 1495938 4 / 90353 0 / 0 2 / 90885 67 / 1495938
cerebrum 6 / 198932   -- -- 6 / 198932 0 / 3422 -- --
cervix   5 / 44577 -- -- 0 / 3888 5 / 44577 -- --
colon 3 / 26551 17 / 151167 7 / 98089 48 / 643586 3 / 26551 17 / 151167 7 / 98089 48 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 18 / 246043   -- -- 18 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 7 / 128826 3 / 46440 11 / 85898 61 / 12434232 7 / 128826 3 / 46440 11 / 85898 61 / 12434232
gastrointestinal tract 2 / 28803 1 / 12721 1 / 45908 -- 2 / 28803 1 / 12721 1 / 45908 --
heart 7 / 76442   1 / 83063 -- 7 / 76442 0 / 1 1 / 83063 --
kidney 2 / 106627 9 / 89898 9 / 155372 3 / 100281 2 / 106627 9 / 89898 9 / 155372 3 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 3 / 107249 1 / 66308 3 / 214987 1 / 96846 3 / 107249 1 / 66308 3 / 214987
lung 7 / 128150 13 / 170663 7 / 159917 5 / 159059 7 / 128150 13 / 170663 7 / 159917 5 / 159059
lymph node 2 / 62650   106 / 5278419   2 / 62650 0 / 27007 106 / 5278419 0 / 4863489
lymphoreticular 1 / 17836 1 / 44303 -- -- 1 / 17836 1 / 44303 -- --
mammary gland 2 / 46553 8 / 104307 6601 / 43166038 315 / 30312656 2 / 46553 8 / 104307 6601 / 43166038 315 / 30312656
muscle   5 / 27691     0 / 74039 5 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 12 / 89988 7 / 94887 13 / 179472 1 / 11462 12 / 89988 7 / 94887 13 / 179472
pancreas   18 / 74930 18 / 85728 19 / 189999 0 / 7237 18 / 74930 18 / 85728 19 / 189999
pancreatic islet 6 / 96524   -- -- 6 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 13 / 241088 11 / 39531 3 / 207348 -- 13 / 241088 11 / 39531 3 / 207348 --
pooled tissue 23 / 276455   -- -- 23 / 276455 0 / 0 -- --
prostate 3 / 79993 15 / 107080 7 / 266949 14 / 491794 3 / 79993 15 / 107080 7 / 266949 14 / 491794
retina   -- 13 / 820326 1 / 88490 0 / 29438 -- 13 / 820326 1 / 88490
salivary gland   4 / 10368 -- -- 0 / 2490 4 / 10368 -- --
skin 4 / 73633 15 / 125377 71 / 26905847 98 / 34522313 4 / 73633 15 / 125377 71 / 26905847 98 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 16 / 52939   -- -- 16 / 52939 0 / 5 -- --
stem cell -- -- 68 / 6230144 -- -- -- 68 / 6230144 --
stomach     2 / 124767 12 / 448716 0 / 26641 0 / 65644 2 / 124767 12 / 448716
synovium   1 / 1650 -- -- 0 / 249 1 / 1650 -- --
testis 20 / 143630 6 / 100058 -- 138 / 12372003 20 / 143630 6 / 100058 -- 138 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid 2 / 11737 3 / 32606 5 / 115938 1 / 124664 2 / 11737 3 / 32606 5 / 115938 1 / 124664
uncharacterized tissue 10 / 207932 48 / 479819 4 / 21833 3 / 51729 10 / 207932 48 / 479819 4 / 21833 3 / 51729
uterus 1 / 38063 14 / 133582 122 / 10193077 -- 1 / 38063 14 / 133582 122 / 10193077 --
vascular   -- 43 / 13135050 -- 0 / 46250 -- 43 / 13135050 --
white blood cells -- -- 21 / 846268 -- -- -- 21 / 846268 --
whole body -- -- -- -- -- -- -- --