Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Tissues
  • Tools
  • SNPs by tissue
  • CGAP Data
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.597664Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 214 / 3316537 126 / 2498449 808 / 114162531 320 / 109592465 214 / 3316537 126 / 2498449 808 / 114162531 320 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 2 / 16077 4 / 57865 -- 13 / 83577 2 / 16077 4 / 57865 -- 13 / 83577
bone marrow     3 / 5047110   0 / 14774 0 / 29891 3 / 5047110 0 / 4978364
brain 37 / 506301 6 / 200215 14 / 729526 91 / 4997811 37 / 506301 6 / 200215 14 / 729526 91 / 4997811
cartilage   5 / 37226 -- 27 / 778035 0 / 15965 5 / 37226 -- 27 / 778035
cerebellum 8 / 90353   2 / 90885 11 / 1495938 8 / 90353 0 / 0 2 / 90885 11 / 1495938
cerebrum 19 / 198932   -- -- 19 / 198932 0 / 3422 -- --
cervix   1 / 44577 -- -- 0 / 3888 1 / 44577 -- --
colon   12 / 151167   17 / 643586 0 / 26551 12 / 151167 0 / 98089 17 / 643586
ear 4 / 16130 -- -- -- 4 / 16130 -- -- --
embryonic tissue 4 / 246043   -- -- 4 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 4 / 128826 1 / 46440 3 / 85898 5 / 12434232 4 / 128826 1 / 46440 3 / 85898 5 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart 1 / 76442   2 / 83063 -- 1 / 76442 0 / 1 2 / 83063 --
kidney 7 / 106627 2 / 89898   2 / 100281 7 / 106627 2 / 89898 0 / 155372 2 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846       1 / 96846 0 / 107249 0 / 66308 0 / 214987
lung 3 / 128150 9 / 170663 1 / 159917 1 / 159059 3 / 128150 9 / 170663 1 / 159917 1 / 159059
lymph node 4 / 62650 1 / 27007 13 / 5278419   4 / 62650 1 / 27007 13 / 5278419 0 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland 4 / 46553 7 / 104307 503 / 43166038 71 / 30312656 4 / 46553 7 / 104307 503 / 43166038 71 / 30312656
muscle 6 / 74039     1 / 61270 6 / 74039 0 / 27691 0 / 107836 1 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary   2 / 89988 1 / 94887 2 / 179472 0 / 11462 2 / 89988 1 / 94887 2 / 179472
pancreas 2 / 7237 4 / 74930   2 / 189999 2 / 7237 4 / 74930 0 / 85728 2 / 189999
pancreatic islet 4 / 96524   -- -- 4 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system   1 / 645 -- -- 0 / 14891 1 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260 1 / 1358 -- -- 1 / 13260 1 / 1358 -- --
placenta 13 / 241088 2 / 39531 1 / 207348 -- 13 / 241088 2 / 39531 1 / 207348 --
pooled tissue 14 / 276455   -- -- 14 / 276455 0 / 0 -- --
prostate 4 / 79993   1 / 266949 2 / 491794 4 / 79993 0 / 107080 1 / 266949 2 / 491794
retina 2 / 29438 -- 10 / 820326   2 / 29438 -- 10 / 820326 0 / 88490
salivary gland   2 / 10368 -- -- 0 / 2490 2 / 10368 -- --
skin 27 / 73633 3 / 125377 43 / 26905847 53 / 34522313 27 / 73633 3 / 125377 43 / 26905847 53 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 3 / 52939   -- -- 3 / 52939 0 / 5 -- --
stem cell -- -- 15 / 6230144 -- -- -- 15 / 6230144 --
stomach 3 / 26641 11 / 65644 1 / 124767 3 / 448716 3 / 26641 11 / 65644 1 / 124767 3 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 12 / 143630 10 / 100058 -- 17 / 12372003 12 / 143630 10 / 100058 -- 17 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 3 / 11737   1 / 115938 2 / 124664 3 / 11737 0 / 32606 1 / 115938 2 / 124664
uncharacterized tissue 12 / 207932 28 / 479819     12 / 207932 28 / 479819 0 / 21833 0 / 51729
uterus 3 / 38063 13 / 133582 174 / 10193077 -- 3 / 38063 13 / 133582 174 / 10193077 --
vascular 2 / 46250 -- 10 / 13135050 -- 2 / 46250 -- 10 / 13135050 --
white blood cells -- -- 10 / 846268 -- -- -- 10 / 846268 --
whole body -- -- -- -- -- -- -- --