Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Tissues
  • Tools
  • SNPs by tissue
  • CGAP Data
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.595562Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 2 / 3316537 2 / 2498449 25874 / 114162531 34772 / 109592465 2 / 3316537 2 / 2498449 25874 / 114162531 34772 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone     --   0 / 16077 0 / 57865 -- 0 / 83577
bone marrow     28 / 5047110 33 / 4978364 0 / 14774 0 / 29891 28 / 5047110 33 / 4978364
brain     19 / 729526 446 / 4997811 0 / 506301 0 / 200215 19 / 729526 446 / 4997811
cartilage     -- 8 / 778035 0 / 15965 0 / 37226 -- 8 / 778035
cerebellum     2 / 90885 86 / 1495938 0 / 90353 0 / 0 2 / 90885 86 / 1495938
cerebrum     -- -- 0 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon       43 / 643586 0 / 26551 0 / 151167 0 / 98089 43 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue     -- -- 0 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye     4 / 85898 8736 / 12434232 0 / 128826 0 / 46440 4 / 85898 8736 / 12434232
gastrointestinal tract     1 / 45908 -- 0 / 28803 0 / 12721 1 / 45908 --
heart     5 / 83063 -- 0 / 76442 0 / 1 5 / 83063 --
kidney     13 / 155372 6 / 100281 0 / 106627 0 / 89898 13 / 155372 6 / 100281
limb -- -- -- -- -- -- -- --
liver     4 / 66308 11 / 214987 0 / 96846 0 / 107249 4 / 66308 11 / 214987
lung   1 / 170663 3 / 159917 4 / 159059 0 / 128150 1 / 170663 3 / 159917 4 / 159059
lymph node     397 / 5278419 218 / 4863489 0 / 62650 0 / 27007 397 / 5278419 218 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland     73 / 43166038 3730 / 30312656 0 / 46553 0 / 104307 73 / 43166038 3730 / 30312656
muscle     3 / 107836 4 / 61270 0 / 74039 0 / 27691 3 / 107836 4 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary     10 / 94887 7 / 179472 0 / 11462 0 / 89988 10 / 94887 7 / 179472
pancreas     4 / 85728 4 / 189999 0 / 7237 0 / 74930 4 / 85728 4 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta     9 / 207348 -- 0 / 241088 0 / 39531 9 / 207348 --
pooled tissue     -- -- 0 / 276455 0 / 0 -- --
prostate 1 / 79993   8 / 266949 22 / 491794 1 / 79993 0 / 107080 8 / 266949 22 / 491794
retina   -- 54 / 820326 7 / 88490 0 / 29438 -- 54 / 820326 7 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin     12869 / 26905847 20133 / 34522313 0 / 73633 0 / 125377 12869 / 26905847 20133 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 4329 / 6230144 -- -- -- 4329 / 6230144 --
stomach     2 / 124767 16 / 448716 0 / 26641 0 / 65644 2 / 124767 16 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis     -- 1235 / 12372003 0 / 143630 0 / 100058 -- 1235 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     12 / 115938 11 / 124664 0 / 11737 0 / 32606 12 / 115938 11 / 124664
uncharacterized tissue   1 / 479819 2 / 21833 12 / 51729 0 / 207932 1 / 479819 2 / 21833 12 / 51729
uterus     663 / 10193077 -- 0 / 38063 0 / 133582 663 / 10193077 --
vascular   -- 7324 / 13135050 -- 0 / 46250 -- 7324 / 13135050 --
white blood cells -- -- 36 / 846268 -- -- -- 36 / 846268 --
whole body -- -- -- -- -- -- -- --