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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.594504Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 200 / 3316537 145 / 2498449 2301 / 114162531 3484 / 109592465 200 / 3316537 145 / 2498449 2301 / 114162531 3484 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 9 / 57865 --   1 / 16077 9 / 57865 -- 0 / 83577
bone marrow   8 / 29891   25 / 4978364 0 / 14774 8 / 29891 0 / 5047110 25 / 4978364
brain 26 / 506301 7 / 200215 14 / 729526 79 / 4997811 26 / 506301 7 / 200215 14 / 729526 79 / 4997811
cartilage   2 / 37226 -- 2 / 778035 0 / 15965 2 / 37226 -- 2 / 778035
cerebellum 4 / 90353     17 / 1495938 4 / 90353 0 / 0 0 / 90885 17 / 1495938
cerebrum 11 / 198932   -- -- 11 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon 1 / 26551 6 / 151167 1 / 98089 4 / 643586 1 / 26551 6 / 151167 1 / 98089 4 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 21 / 246043   -- -- 21 / 246043 0 / 38 -- --
endocrine 3 / 19564   -- -- 3 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 4 / 128826 2 / 46440 1 / 85898 1202 / 12434232 4 / 128826 2 / 46440 1 / 85898 1202 / 12434232
gastrointestinal tract   1 / 12721   -- 0 / 28803 1 / 12721 0 / 45908 --
heart 3 / 76442   3 / 83063 -- 3 / 76442 0 / 1 3 / 83063 --
kidney 9 / 106627 3 / 89898 1 / 155372   9 / 106627 3 / 89898 1 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 3 / 96846     1 / 214987 3 / 96846 0 / 107249 0 / 66308 1 / 214987
lung 9 / 128150 17 / 170663 2 / 159917 1 / 159059 9 / 128150 17 / 170663 2 / 159917 1 / 159059
lymph node 5 / 62650 2 / 27007 46 / 5278419 8 / 4863489 5 / 62650 2 / 27007 46 / 5278419 8 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 5 / 46553 4 / 104307 145 / 43166038 509 / 30312656 5 / 46553 4 / 104307 145 / 43166038 509 / 30312656
muscle 5 / 74039       5 / 74039 0 / 27691 0 / 107836 0 / 61270
nervous 2 / 10333   -- -- 2 / 10333 0 / 8 -- --
ovary   12 / 89988 1 / 94887 2 / 179472 0 / 11462 12 / 89988 1 / 94887 2 / 179472
pancreas   3 / 74930   1 / 189999 0 / 7237 3 / 74930 0 / 85728 1 / 189999
pancreatic islet 9 / 96524   -- -- 9 / 96524 0 / 30072 -- --
parathyroid   2 / 20557 -- -- 0 / 24 2 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 2 / 13260   -- -- 2 / 13260 0 / 1358 -- --
placenta 10 / 241088 4 / 39531   -- 10 / 241088 4 / 39531 0 / 207348 --
pooled tissue 30 / 276455   -- -- 30 / 276455 0 / 0 -- --
prostate 3 / 79993 8 / 107080 3 / 266949 3 / 491794 3 / 79993 8 / 107080 3 / 266949 3 / 491794
retina   -- 22 / 820326 1 / 88490 0 / 29438 -- 22 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 1 / 73633 10 / 125377 875 / 26905847 1370 / 34522313 1 / 73633 10 / 125377 875 / 26905847 1370 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 589 / 6230144 -- -- -- 589 / 6230144 --
stomach 3 / 26641 1 / 65644 5 / 124767 5 / 448716 3 / 26641 1 / 65644 5 / 124767 5 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 7 / 143630 7 / 100058 -- 253 / 12372003 7 / 143630 7 / 100058 -- 253 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid 1 / 11737 6 / 32606     1 / 11737 6 / 32606 0 / 115938 0 / 124664
uncharacterized tissue 12 / 207932 26 / 479819   1 / 51729 12 / 207932 26 / 479819 0 / 21833 1 / 51729
uterus 5 / 38063 5 / 133582 164 / 10193077 -- 5 / 38063 5 / 133582 164 / 10193077 --
vascular 2 / 46250 -- 425 / 13135050 -- 2 / 46250 -- 425 / 13135050 --
white blood cells -- -- 4 / 846268 -- -- -- 4 / 846268 --
whole body -- -- -- -- -- -- -- --