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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.594238Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 888 / 3316537 1320 / 2498449 4451 / 114162531 9905 / 109592465 888 / 3316537 1320 / 2498449 4451 / 114162531 9905 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 2 / 16077 8 / 57865 --   2 / 16077 8 / 57865 -- 0 / 83577
bone marrow 3 / 14774 7 / 29891 285 / 5047110 265 / 4978364 3 / 14774 7 / 29891 285 / 5047110 265 / 4978364
brain 102 / 506301 295 / 200215 12 / 729526 260 / 4997811 102 / 506301 295 / 200215 12 / 729526 260 / 4997811
cartilage 11 / 15965 5 / 37226 -- 26 / 778035 11 / 15965 5 / 37226 -- 26 / 778035
cerebellum 16 / 90353   2 / 90885 120 / 1495938 16 / 90353 0 / 0 2 / 90885 120 / 1495938
cerebrum 22 / 198932   -- -- 22 / 198932 0 / 3422 -- --
cervix   21 / 44577 -- -- 0 / 3888 21 / 44577 -- --
colon 1 / 26551 31 / 151167   41 / 643586 1 / 26551 31 / 151167 0 / 98089 41 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 109 / 246043   -- -- 109 / 246043 0 / 38 -- --
endocrine 3 / 19564   -- -- 3 / 19564 0 / 2857 -- --
esophagus   16 / 17290 -- -- 0 / 270 16 / 17290 -- --
eye 9 / 128826 59 / 46440 7 / 85898 465 / 12434232 9 / 128826 59 / 46440 7 / 85898 465 / 12434232
gastrointestinal tract 13 / 28803 5 / 12721   -- 13 / 28803 5 / 12721 0 / 45908 --
heart 16 / 76442   1 / 83063 -- 16 / 76442 0 / 1 1 / 83063 --
kidney 22 / 106627 24 / 89898 13 / 155372 15 / 100281 22 / 106627 24 / 89898 13 / 155372 15 / 100281
limb -- -- -- -- -- -- -- --
liver 4 / 96846 60 / 107249 1 / 66308 8 / 214987 4 / 96846 60 / 107249 1 / 66308 8 / 214987
lung 8 / 128150 29 / 170663 3 / 159917 6 / 159059 8 / 128150 29 / 170663 3 / 159917 6 / 159059
lymph node 12 / 62650 2 / 27007 343 / 5278419 157 / 4863489 12 / 62650 2 / 27007 343 / 5278419 157 / 4863489
lymphoreticular 4 / 17836 16 / 44303 -- -- 4 / 17836 16 / 44303 -- --
mammary gland 9 / 46553 41 / 104307 265 / 43166038 4865 / 30312656 9 / 46553 41 / 104307 265 / 43166038 4865 / 30312656
muscle 1 / 74039 18 / 27691   2 / 61270 1 / 74039 18 / 27691 0 / 107836 2 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   15 / 89988 12 / 94887 14 / 179472 0 / 11462 15 / 89988 12 / 94887 14 / 179472
pancreas   18 / 74930 2 / 85728 7 / 189999 0 / 7237 18 / 74930 2 / 85728 7 / 189999
pancreatic islet 3 / 96524   -- -- 3 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 33 / 241088 28 / 39531 4 / 207348 -- 33 / 241088 28 / 39531 4 / 207348 --
pooled tissue 41 / 276455   -- -- 41 / 276455 0 / 0 -- --
prostate 3 / 79993 25 / 107080 5 / 266949 21 / 491794 3 / 79993 25 / 107080 5 / 266949 21 / 491794
retina   -- 3 / 820326 11 / 88490 0 / 29438 -- 3 / 820326 11 / 88490
salivary gland   5 / 10368 -- -- 0 / 2490 5 / 10368 -- --
skin 9 / 73633 95 / 125377 238 / 26905847 1019 / 34522313 9 / 73633 95 / 125377 238 / 26905847 1019 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 5 / 52939   -- -- 5 / 52939 0 / 5 -- --
stem cell -- -- 1370 / 6230144 -- -- -- 1370 / 6230144 --
stomach 1 / 26641 96 / 65644 5 / 124767 17 / 448716 1 / 26641 96 / 65644 5 / 124767 17 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 318 / 143630 68 / 100058 -- 2574 / 12372003 318 / 143630 68 / 100058 -- 2574 / 12372003
thymus 2 / 4478   -- -- 2 / 4478 0 / 165 -- --
thyroid   4 / 32606   3 / 124664 0 / 11737 4 / 32606 0 / 115938 3 / 124664
uncharacterized tissue 80 / 207932 283 / 479819   9 / 51729 80 / 207932 283 / 479819 0 / 21833 9 / 51729
uterus 3 / 38063 44 / 133582 29 / 10193077 -- 3 / 38063 44 / 133582 29 / 10193077 --
vascular 22 / 46250 -- 1842 / 13135050 -- 22 / 46250 -- 1842 / 13135050 --
white blood cells -- -- 9 / 846268 -- -- -- 9 / 846268 --
whole body -- -- -- -- -- -- -- --