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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.593973Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 156 / 3316537 150 / 2498449 969 / 114162531 1158 / 109592465 156 / 3316537 150 / 2498449 969 / 114162531 1158 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   5 / 57865 -- 2 / 83577 0 / 16077 5 / 57865 -- 2 / 83577
bone marrow   8 / 29891 43 / 5047110 40 / 4978364 0 / 14774 8 / 29891 43 / 5047110 40 / 4978364
brain 5 / 506301 11 / 200215 4 / 729526 60 / 4997811 5 / 506301 11 / 200215 4 / 729526 60 / 4997811
cartilage   2 / 37226 -- 3 / 778035 0 / 15965 2 / 37226 -- 3 / 778035
cerebellum 1 / 90353   1 / 90885 20 / 1495938 1 / 90353 0 / 0 1 / 90885 20 / 1495938
cerebrum 3 / 198932   -- -- 3 / 198932 0 / 3422 -- --
cervix   1 / 44577 -- -- 0 / 3888 1 / 44577 -- --
colon 3 / 26551 13 / 151167 2 / 98089 11 / 643586 3 / 26551 13 / 151167 2 / 98089 11 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 10 / 246043   -- -- 10 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 16 / 128826     152 / 12434232 16 / 128826 0 / 46440 0 / 85898 152 / 12434232
gastrointestinal tract 2 / 28803 1 / 12721 1 / 45908 -- 2 / 28803 1 / 12721 1 / 45908 --
heart 4 / 76442   2 / 83063 -- 4 / 76442 0 / 1 2 / 83063 --
kidney 2 / 106627 2 / 89898   4 / 100281 2 / 106627 2 / 89898 0 / 155372 4 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846 10 / 107249   2 / 214987 2 / 96846 10 / 107249 0 / 66308 2 / 214987
lung 8 / 128150 3 / 170663 2 / 159917 2 / 159059 8 / 128150 3 / 170663 2 / 159917 2 / 159059
lymph node 7 / 62650 2 / 27007 46 / 5278419 22 / 4863489 7 / 62650 2 / 27007 46 / 5278419 22 / 4863489
lymphoreticular   3 / 44303 -- -- 0 / 17836 3 / 44303 -- --
mammary gland 3 / 46553 2 / 104307 143 / 43166038 282 / 30312656 3 / 46553 2 / 104307 143 / 43166038 282 / 30312656
muscle 4 / 74039       4 / 74039 0 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   3 / 89988 1 / 94887 5 / 179472 0 / 11462 3 / 89988 1 / 94887 5 / 179472
pancreas   3 / 74930 1 / 85728 4 / 189999 0 / 7237 3 / 74930 1 / 85728 4 / 189999
pancreatic islet 4 / 96524   -- -- 4 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland 3 / 6170 -- -- -- 3 / 6170 -- -- --
pituitary gland 2 / 13260   -- -- 2 / 13260 0 / 1358 -- --
placenta 18 / 241088 9 / 39531 4 / 207348 -- 18 / 241088 9 / 39531 4 / 207348 --
pooled tissue 15 / 276455   -- -- 15 / 276455 0 / 0 -- --
prostate 4 / 79993 11 / 107080 4 / 266949 4 / 491794 4 / 79993 11 / 107080 4 / 266949 4 / 491794
retina   -- 7 / 820326 2 / 88490 0 / 29438 -- 7 / 820326 2 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 4 / 73633 10 / 125377 229 / 26905847 243 / 34522313 4 / 73633 10 / 125377 229 / 26905847 243 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 109 / 6230144 -- -- -- 109 / 6230144 --
stomach 2 / 26641 3 / 65644 1 / 124767 2 / 448716 2 / 26641 3 / 65644 1 / 124767 2 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 19 / 143630 5 / 100058 -- 293 / 12372003 19 / 143630 5 / 100058 -- 293 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   2 / 32606 1 / 115938 3 / 124664 0 / 11737 2 / 32606 1 / 115938 3 / 124664
uncharacterized tissue 10 / 207932 29 / 479819 3 / 21833 2 / 51729 10 / 207932 29 / 479819 3 / 21833 2 / 51729
uterus 2 / 38063 12 / 133582 146 / 10193077 -- 2 / 38063 12 / 133582 146 / 10193077 --
vascular   -- 208 / 13135050 -- 0 / 46250 -- 208 / 13135050 --
white blood cells -- -- 11 / 846268 -- -- -- 11 / 846268 --
whole body -- -- -- -- -- -- -- --