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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.588815Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 123 / 3316537 119 / 2498449 1374 / 114162531 1692 / 109592465 123 / 3316537 119 / 2498449 1374 / 114162531 1692 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   6 / 57865 --   0 / 16077 6 / 57865 -- 0 / 83577
bone marrow     39 / 5047110   0 / 14774 0 / 29891 39 / 5047110 0 / 4978364
brain 8 / 506301 9 / 200215 5 / 729526 54 / 4997811 8 / 506301 9 / 200215 5 / 729526 54 / 4997811
cartilage   2 / 37226 -- 10 / 778035 0 / 15965 2 / 37226 -- 10 / 778035
cerebellum 1 / 90353   2 / 90885 7 / 1495938 1 / 90353 0 / 0 2 / 90885 7 / 1495938
cerebrum     -- -- 0 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon   11 / 151167   1 / 643586 0 / 26551 11 / 151167 0 / 98089 1 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 23 / 246043   -- -- 23 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 3 / 128826 1 / 46440   495 / 12434232 3 / 128826 1 / 46440 0 / 85898 495 / 12434232
gastrointestinal tract   1 / 12721   -- 0 / 28803 1 / 12721 0 / 45908 --
heart 1 / 76442   1 / 83063 -- 1 / 76442 0 / 1 1 / 83063 --
kidney 2 / 106627 3 / 89898 3 / 155372   2 / 106627 3 / 89898 3 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 20 / 96846 7 / 107249     20 / 96846 7 / 107249 0 / 66308 0 / 214987
lung 11 / 128150 9 / 170663 2 / 159917   11 / 128150 9 / 170663 2 / 159917 0 / 159059
lymph node 1 / 62650   33 / 5278419 20 / 4863489 1 / 62650 0 / 27007 33 / 5278419 20 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 2 / 46553 3 / 104307 108 / 43166038 442 / 30312656 2 / 46553 3 / 104307 108 / 43166038 442 / 30312656
muscle 2 / 74039 1 / 27691 1 / 107836   2 / 74039 1 / 27691 1 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 4 / 89988 2 / 94887 1 / 179472 1 / 11462 4 / 89988 2 / 94887 1 / 179472
pancreas   2 / 74930   2 / 189999 0 / 7237 2 / 74930 0 / 85728 2 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 18 / 241088   4 / 207348 -- 18 / 241088 0 / 39531 4 / 207348 --
pooled tissue 5 / 276455   -- -- 5 / 276455 0 / 0 -- --
prostate 6 / 79993 3 / 107080 1 / 266949 3 / 491794 6 / 79993 3 / 107080 1 / 266949 3 / 491794
retina   -- 12 / 820326 1 / 88490 0 / 29438 -- 12 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 10 / 73633 4 / 125377 358 / 26905847 428 / 34522313 10 / 73633 4 / 125377 358 / 26905847 428 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 2 / 52939   -- -- 2 / 52939 0 / 5 -- --
stem cell -- -- 276 / 6230144 -- -- -- 276 / 6230144 --
stomach   3 / 65644 1 / 124767 2 / 448716 0 / 26641 3 / 65644 1 / 124767 2 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 3 / 143630 6 / 100058 -- 224 / 12372003 3 / 143630 6 / 100058 -- 224 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   2 / 32606   1 / 124664 0 / 11737 2 / 32606 0 / 115938 1 / 124664
uncharacterized tissue 2 / 207932 35 / 479819   1 / 51729 2 / 207932 35 / 479819 0 / 21833 1 / 51729
uterus   6 / 133582 213 / 10193077 -- 0 / 38063 6 / 133582 213 / 10193077 --
vascular   -- 308 / 13135050 -- 0 / 46250 -- 308 / 13135050 --
white blood cells -- -- 5 / 846268 -- -- -- 5 / 846268 --
whole body -- -- -- -- -- -- -- --