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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.579079Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 230 / 3316537 96 / 2498449 1396 / 114162531 2139 / 109592465 230 / 3316537 96 / 2498449 1396 / 114162531 2139 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   4 / 57865 --   0 / 16077 4 / 57865 -- 0 / 83577
bone marrow     8 / 5047110 28 / 4978364 0 / 14774 0 / 29891 8 / 5047110 28 / 4978364
brain 82 / 506301 6 / 200215 56 / 729526 173 / 4997811 82 / 506301 6 / 200215 56 / 729526 173 / 4997811
cartilage 1 / 15965 3 / 37226 -- 5 / 778035 1 / 15965 3 / 37226 -- 5 / 778035
cerebellum 21 / 90353   4 / 90885 65 / 1495938 21 / 90353 0 / 0 4 / 90885 65 / 1495938
cerebrum 45 / 198932   -- -- 45 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon   7 / 151167 2 / 98089 6 / 643586 0 / 26551 7 / 151167 2 / 98089 6 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 16 / 246043   -- -- 16 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye 3 / 128826 7 / 46440 1 / 85898 568 / 12434232 3 / 128826 7 / 46440 1 / 85898 568 / 12434232
gastrointestinal tract 1 / 28803     -- 1 / 28803 0 / 12721 0 / 45908 --
heart 2 / 76442   1 / 83063 -- 2 / 76442 0 / 1 1 / 83063 --
kidney 2 / 106627 9 / 89898 1 / 155372   2 / 106627 9 / 89898 1 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 8 / 107249 1 / 66308   1 / 96846 8 / 107249 1 / 66308 0 / 214987
lung 5 / 128150 3 / 170663 1 / 159917 1 / 159059 5 / 128150 3 / 170663 1 / 159917 1 / 159059
lymph node 1 / 62650   107 / 5278419 24 / 4863489 1 / 62650 0 / 27007 107 / 5278419 24 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland   9 / 104307 380 / 43166038 548 / 30312656 0 / 46553 9 / 104307 380 / 43166038 548 / 30312656
muscle 3 / 74039     1 / 61270 3 / 74039 0 / 27691 0 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   1 / 89988 1 / 94887 2 / 179472 0 / 11462 1 / 89988 1 / 94887 2 / 179472
pancreas 2 / 7237   1 / 85728 5 / 189999 2 / 7237 0 / 74930 1 / 85728 5 / 189999
pancreatic islet 1 / 96524   -- -- 1 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 2 / 13260   -- -- 2 / 13260 0 / 1358 -- --
placenta 10 / 241088   3 / 207348 -- 10 / 241088 0 / 39531 3 / 207348 --
pooled tissue 4 / 276455   -- -- 4 / 276455 0 / 0 -- --
prostate     2 / 266949 8 / 491794 0 / 79993 0 / 107080 2 / 266949 8 / 491794
retina 1 / 29438 -- 38 / 820326 8 / 88490 1 / 29438 -- 38 / 820326 8 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin   4 / 125377 151 / 26905847 350 / 34522313 0 / 73633 4 / 125377 151 / 26905847 350 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 167 / 6230144 -- -- -- 167 / 6230144 --
stomach     5 / 124767 2 / 448716 0 / 26641 0 / 65644 5 / 124767 2 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 20 / 143630 5 / 100058 -- 340 / 12372003 20 / 143630 5 / 100058 -- 340 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   3 / 32606   2 / 124664 0 / 11737 3 / 32606 0 / 115938 2 / 124664
uncharacterized tissue 4 / 207932 21 / 479819   3 / 51729 4 / 207932 21 / 479819 0 / 21833 3 / 51729
uterus 2 / 38063 3 / 133582 131 / 10193077 -- 2 / 38063 3 / 133582 131 / 10193077 --
vascular   -- 331 / 13135050 -- 0 / 46250 -- 331 / 13135050 --
white blood cells -- -- 4 / 846268 -- -- -- 4 / 846268 --
whole body -- -- -- -- -- -- -- --