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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.5741Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 78 / 3316537 55 / 2498449 241 / 114162531 564 / 109592465 78 / 3316537 55 / 2498449 241 / 114162531 564 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone     --   0 / 16077 0 / 57865 -- 0 / 83577
bone marrow     2 / 5047110 7 / 4978364 0 / 14774 0 / 29891 2 / 5047110 7 / 4978364
brain 5 / 506301 4 / 200215 3 / 729526 37 / 4997811 5 / 506301 4 / 200215 3 / 729526 37 / 4997811
cartilage 1 / 15965   -- 2 / 778035 1 / 15965 0 / 37226 -- 2 / 778035
cerebellum       16 / 1495938 0 / 90353 0 / 0 0 / 90885 16 / 1495938
cerebrum 2 / 198932   -- -- 2 / 198932 0 / 3422 -- --
cervix   1 / 44577 -- -- 0 / 3888 1 / 44577 -- --
colon   3 / 151167   2 / 643586 0 / 26551 3 / 151167 0 / 98089 2 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 3 / 246043   -- -- 3 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 1 / 128826 1 / 46440   31 / 12434232 1 / 128826 1 / 46440 0 / 85898 31 / 12434232
gastrointestinal tract     2 / 45908 -- 0 / 28803 0 / 12721 2 / 45908 --
heart     1 / 83063 -- 0 / 76442 0 / 1 1 / 83063 --
kidney 3 / 106627 3 / 89898     3 / 106627 3 / 89898 0 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 4 / 107249   1 / 214987 1 / 96846 4 / 107249 0 / 66308 1 / 214987
lung 4 / 128150 2 / 170663 5 / 159917 3 / 159059 4 / 128150 2 / 170663 5 / 159917 3 / 159059
lymph node 5 / 62650 2 / 27007 58 / 5278419 137 / 4863489 5 / 62650 2 / 27007 58 / 5278419 137 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland 3 / 46553 3 / 104307 38 / 43166038 181 / 30312656 3 / 46553 3 / 104307 38 / 43166038 181 / 30312656
muscle 2 / 74039   1 / 107836   2 / 74039 0 / 27691 1 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   4 / 89988   2 / 179472 0 / 11462 4 / 89988 0 / 94887 2 / 179472
pancreas       4 / 189999 0 / 7237 0 / 74930 0 / 85728 4 / 189999
pancreatic islet 1 / 96524   -- -- 1 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 14 / 241088   3 / 207348 -- 14 / 241088 0 / 39531 3 / 207348 --
pooled tissue 4 / 276455   -- -- 4 / 276455 0 / 0 -- --
prostate 1 / 79993     3 / 491794 1 / 79993 0 / 107080 0 / 266949 3 / 491794
retina   -- 3 / 820326 1 / 88490 0 / 29438 -- 3 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin   1 / 125377 54 / 26905847 110 / 34522313 0 / 73633 1 / 125377 54 / 26905847 110 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 6 / 6230144 -- -- -- 6 / 6230144 --
stomach 1 / 26641   5 / 124767 8 / 448716 1 / 26641 0 / 65644 5 / 124767 8 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 16 / 143630 1 / 100058 -- 16 / 12372003 16 / 143630 1 / 100058 -- 16 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   2 / 32606 1 / 115938 2 / 124664 0 / 11737 2 / 32606 1 / 115938 2 / 124664
uncharacterized tissue 8 / 207932 19 / 479819   1 / 51729 8 / 207932 19 / 479819 0 / 21833 1 / 51729
uterus   2 / 133582 22 / 10193077 -- 0 / 38063 2 / 133582 22 / 10193077 --
vascular 2 / 46250 -- 21 / 13135050 -- 2 / 46250 -- 21 / 13135050 --
white blood cells -- -- 16 / 846268 -- -- -- 16 / 846268 --
whole body -- -- -- -- -- -- -- --