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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.567725Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 148 / 3316537 112 / 2498449 8227 / 114162531 3419 / 109592465 148 / 3316537 112 / 2498449 8227 / 114162531 3419 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   3 / 57865 --   0 / 16077 3 / 57865 -- 0 / 83577
bone marrow 2 / 14774     44 / 4978364 2 / 14774 0 / 29891 0 / 5047110 44 / 4978364
brain 8 / 506301 3 / 200215 6 / 729526 50 / 4997811 8 / 506301 3 / 200215 6 / 729526 50 / 4997811
cartilage 1 / 15965 7 / 37226 -- 3 / 778035 1 / 15965 7 / 37226 -- 3 / 778035
cerebellum 3 / 90353     18 / 1495938 3 / 90353 0 / 0 0 / 90885 18 / 1495938
cerebrum 6 / 198932   -- -- 6 / 198932 0 / 3422 -- --
cervix   2 / 44577 -- -- 0 / 3888 2 / 44577 -- --
colon 4 / 26551 23 / 151167   4 / 643586 4 / 26551 23 / 151167 0 / 98089 4 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 19 / 246043   -- -- 19 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 8 / 128826   1 / 85898 679 / 12434232 8 / 128826 0 / 46440 1 / 85898 679 / 12434232
gastrointestinal tract 3 / 28803   1 / 45908 -- 3 / 28803 0 / 12721 1 / 45908 --
heart     7 / 83063 -- 0 / 76442 0 / 1 7 / 83063 --
kidney 4 / 106627 1 / 89898 5 / 155372 1 / 100281 4 / 106627 1 / 89898 5 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver 4 / 96846 5 / 107249 1 / 66308 1 / 214987 4 / 96846 5 / 107249 1 / 66308 1 / 214987
lung 12 / 128150 3 / 170663 1 / 159917   12 / 128150 3 / 170663 1 / 159917 0 / 159059
lymph node     22 / 5278419   0 / 62650 0 / 27007 22 / 5278419 0 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 9 / 46553 10 / 104307 345 / 43166038 640 / 30312656 9 / 46553 10 / 104307 345 / 43166038 640 / 30312656
muscle 2 / 74039     1 / 61270 2 / 74039 0 / 27691 0 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   3 / 89988   3 / 179472 0 / 11462 3 / 89988 0 / 94887 3 / 179472
pancreas   1 / 74930     0 / 7237 1 / 74930 0 / 85728 0 / 189999
pancreatic islet 4 / 96524 1 / 30072 -- -- 4 / 96524 1 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 19 / 241088   4 / 207348 -- 19 / 241088 0 / 39531 4 / 207348 --
pooled tissue 11 / 276455   -- -- 11 / 276455 0 / 0 -- --
prostate 3 / 79993 17 / 107080 2 / 266949 2 / 491794 3 / 79993 17 / 107080 2 / 266949 2 / 491794
retina 2 / 29438 -- 10 / 820326 3 / 88490 2 / 29438 -- 10 / 820326 3 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 1 / 73633 2 / 125377 4059 / 26905847 1730 / 34522313 1 / 73633 2 / 125377 4059 / 26905847 1730 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 1027 / 6230144 -- -- -- 1027 / 6230144 --
stomach 2 / 26641 6 / 65644 3 / 124767 6 / 448716 2 / 26641 6 / 65644 3 / 124767 6 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 4 / 143630 1 / 100058 -- 232 / 12372003 4 / 143630 1 / 100058 -- 232 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 1 / 11737 3 / 32606 3 / 115938 2 / 124664 1 / 11737 3 / 32606 3 / 115938 2 / 124664
uncharacterized tissue 7 / 207932 15 / 479819     7 / 207932 15 / 479819 0 / 21833 0 / 51729
uterus 6 / 38063 6 / 133582 447 / 10193077 -- 6 / 38063 6 / 133582 447 / 10193077 --
vascular 1 / 46250 -- 2283 / 13135050 -- 1 / 46250 -- 2283 / 13135050 --
white blood cells -- --   -- -- -- 0 / 846268 --
whole body -- -- -- -- -- -- -- --