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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.564533Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 156 / 3316537 108 / 2498449 1366 / 114162531 752 / 109592465 156 / 3316537 108 / 2498449 1366 / 114162531 752 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 2 / 16077   -- 1 / 83577 2 / 16077 0 / 57865 -- 1 / 83577
bone marrow     3 / 5047110   0 / 14774 0 / 29891 3 / 5047110 0 / 4978364
brain 35 / 506301 6 / 200215 4 / 729526 26 / 4997811 35 / 506301 6 / 200215 4 / 729526 26 / 4997811
cartilage 1 / 15965   -- 10 / 778035 1 / 15965 0 / 37226 -- 10 / 778035
cerebellum 8 / 90353     3 / 1495938 8 / 90353 0 / 0 0 / 90885 3 / 1495938
cerebrum 2 / 198932   -- -- 2 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon 1 / 26551 6 / 151167 1 / 98089 13 / 643586 1 / 26551 6 / 151167 1 / 98089 13 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 13 / 246043   -- -- 13 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye 21 / 128826     19 / 12434232 21 / 128826 0 / 46440 0 / 85898 19 / 12434232
gastrointestinal tract   1 / 12721   -- 0 / 28803 1 / 12721 0 / 45908 --
heart 2 / 76442   1 / 83063 -- 2 / 76442 0 / 1 1 / 83063 --
kidney 6 / 106627 3 / 89898 2 / 155372 1 / 100281 6 / 106627 3 / 89898 2 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846 3 / 107249 1 / 66308 1 / 214987 2 / 96846 3 / 107249 1 / 66308 1 / 214987
lung 7 / 128150 12 / 170663 2 / 159917 5 / 159059 7 / 128150 12 / 170663 2 / 159917 5 / 159059
lymph node 5 / 62650   48 / 5278419 8 / 4863489 5 / 62650 0 / 27007 48 / 5278419 8 / 4863489
lymphoreticular   3 / 44303 -- -- 0 / 17836 3 / 44303 -- --
mammary gland 1 / 46553 2 / 104307 922 / 43166038 459 / 30312656 1 / 46553 2 / 104307 922 / 43166038 459 / 30312656
muscle 3 / 74039 2 / 27691 1 / 107836 1 / 61270 3 / 74039 2 / 27691 1 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   5 / 89988 1 / 94887 2 / 179472 0 / 11462 5 / 89988 1 / 94887 2 / 179472
pancreas   3 / 74930 2 / 85728 1 / 189999 0 / 7237 3 / 74930 2 / 85728 1 / 189999
pancreatic islet 5 / 96524   -- -- 5 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 5 / 241088 1 / 39531 2 / 207348 -- 5 / 241088 1 / 39531 2 / 207348 --
pooled tissue 11 / 276455   -- -- 11 / 276455 0 / 0 -- --
prostate 2 / 79993   6 / 266949 7 / 491794 2 / 79993 0 / 107080 6 / 266949 7 / 491794
retina   -- 5 / 820326 1 / 88490 0 / 29438 -- 5 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 2 / 73633 35 / 125377 142 / 26905847 69 / 34522313 2 / 73633 35 / 125377 142 / 26905847 69 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 3 / 52939   -- -- 3 / 52939 0 / 5 -- --
stem cell -- -- 75 / 6230144 -- -- -- 75 / 6230144 --
stomach 2 / 26641 1 / 65644   9 / 448716 2 / 26641 1 / 65644 0 / 124767 9 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 11 / 143630 3 / 100058 -- 115 / 12372003 11 / 143630 3 / 100058 -- 115 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606   1 / 124664 0 / 11737 1 / 32606 0 / 115938 1 / 124664
uncharacterized tissue 3 / 207932 15 / 479819     3 / 207932 15 / 479819 0 / 21833 0 / 51729
uterus   3 / 133582 34 / 10193077 -- 0 / 38063 3 / 133582 34 / 10193077 --
vascular 2 / 46250 -- 110 / 13135050 -- 2 / 46250 -- 110 / 13135050 --
white blood cells -- -- 4 / 846268 -- -- -- 4 / 846268 --
whole body -- -- -- -- -- -- -- --