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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.554822Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 139 / 3316537 174 / 2498449 2190 / 114162531 1334 / 109592465 139 / 3316537 174 / 2498449 2190 / 114162531 1334 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone     -- 14 / 83577 0 / 16077 0 / 57865 -- 14 / 83577
bone marrow     6 / 5047110 21 / 4978364 0 / 14774 0 / 29891 6 / 5047110 21 / 4978364
brain 5 / 506301   24 / 729526 134 / 4997811 5 / 506301 0 / 200215 24 / 729526 134 / 4997811
cartilage     -- 47 / 778035 0 / 15965 0 / 37226 -- 47 / 778035
cerebellum       28 / 1495938 0 / 90353 0 / 0 0 / 90885 28 / 1495938
cerebrum     -- -- 0 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon 5 / 26551 31 / 151167 1 / 98089 29 / 643586 5 / 26551 31 / 151167 1 / 98089 29 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 1 / 246043   -- -- 1 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   19 / 17290 -- -- 0 / 270 19 / 17290 -- --
eye 3 / 128826   1 / 85898 149 / 12434232 3 / 128826 0 / 46440 1 / 85898 149 / 12434232
gastrointestinal tract 5 / 28803     -- 5 / 28803 0 / 12721 0 / 45908 --
heart     1 / 83063 -- 0 / 76442 0 / 1 1 / 83063 --
kidney 60 / 106627 38 / 89898 7 / 155372 2 / 100281 60 / 106627 38 / 89898 7 / 155372 2 / 100281
limb -- -- -- -- -- -- -- --
liver 33 / 96846 23 / 107249 7 / 66308 1 / 214987 33 / 96846 23 / 107249 7 / 66308 1 / 214987
lung 5 / 128150 3 / 170663 5 / 159917 9 / 159059 5 / 128150 3 / 170663 5 / 159917 9 / 159059
lymph node   1 / 27007 68 / 5278419 10 / 4863489 0 / 62650 1 / 27007 68 / 5278419 10 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 3 / 46553 2 / 104307 694 / 43166038 330 / 30312656 3 / 46553 2 / 104307 694 / 43166038 330 / 30312656
muscle 2 / 74039   6 / 107836 3 / 61270 2 / 74039 0 / 27691 6 / 107836 3 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary     3 / 94887 5 / 179472 0 / 11462 0 / 89988 3 / 94887 5 / 179472
pancreas   2 / 74930 4 / 85728 18 / 189999 0 / 7237 2 / 74930 4 / 85728 18 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 1 / 241088   4 / 207348 -- 1 / 241088 0 / 39531 4 / 207348 --
pooled tissue 7 / 276455   -- -- 7 / 276455 0 / 0 -- --
prostate 1 / 79993 1 / 107080 16 / 266949 21 / 491794 1 / 79993 1 / 107080 16 / 266949 21 / 491794
retina   -- 3 / 820326 1 / 88490 0 / 29438 -- 3 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 1 / 73633   868 / 26905847 429 / 34522313 1 / 73633 0 / 125377 868 / 26905847 429 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 88 / 6230144 -- -- -- 88 / 6230144 --
stomach   8 / 65644 3 / 124767 14 / 448716 0 / 26641 8 / 65644 3 / 124767 14 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 2 / 143630   -- 63 / 12372003 2 / 143630 0 / 100058 -- 63 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     5 / 115938 4 / 124664 0 / 11737 0 / 32606 5 / 115938 4 / 124664
uncharacterized tissue 5 / 207932 46 / 479819 2 / 21833 2 / 51729 5 / 207932 46 / 479819 2 / 21833 2 / 51729
uterus     99 / 10193077 -- 0 / 38063 0 / 133582 99 / 10193077 --
vascular   -- 250 / 13135050 -- 0 / 46250 -- 250 / 13135050 --
white blood cells -- -- 25 / 846268 -- -- -- 25 / 846268 --
whole body -- -- -- -- -- -- -- --