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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.534667Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 314 / 3316537 227 / 2498449 1437 / 114162531 2143 / 109592465 314 / 3316537 227 / 2498449 1437 / 114162531 2143 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   7 / 57865 --   0 / 16077 7 / 57865 -- 0 / 83577
bone marrow   3 / 29891 58 / 5047110 13 / 4978364 0 / 14774 3 / 29891 58 / 5047110 13 / 4978364
brain 50 / 506301 13 / 200215 2 / 729526 25 / 4997811 50 / 506301 13 / 200215 2 / 729526 25 / 4997811
cartilage 3 / 15965 1 / 37226 -- 1 / 778035 3 / 15965 1 / 37226 -- 1 / 778035
cerebellum 13 / 90353     4 / 1495938 13 / 90353 0 / 0 0 / 90885 4 / 1495938
cerebrum 5 / 198932   -- -- 5 / 198932 0 / 3422 -- --
cervix   17 / 44577 -- -- 0 / 3888 17 / 44577 -- --
colon 10 / 26551 16 / 151167   3 / 643586 10 / 26551 16 / 151167 0 / 98089 3 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 12 / 246043   -- -- 12 / 246043 0 / 38 -- --
endocrine 3 / 19564   -- -- 3 / 19564 0 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye 9 / 128826     780 / 12434232 9 / 128826 0 / 46440 0 / 85898 780 / 12434232
gastrointestinal tract 7 / 28803 1 / 12721   -- 7 / 28803 1 / 12721 0 / 45908 --
heart 2 / 76442     -- 2 / 76442 0 / 1 0 / 83063 --
kidney 16 / 106627 5 / 89898   8 / 100281 16 / 106627 5 / 89898 0 / 155372 8 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 8 / 107249   4 / 214987 1 / 96846 8 / 107249 0 / 66308 4 / 214987
lung 12 / 128150 12 / 170663     12 / 128150 12 / 170663 0 / 159917 0 / 159059
lymph node 3 / 62650 1 / 27007 33 / 5278419 3 / 4863489 3 / 62650 1 / 27007 33 / 5278419 3 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland 10 / 46553 18 / 104307 25 / 43166038 411 / 30312656 10 / 46553 18 / 104307 25 / 43166038 411 / 30312656
muscle 2 / 74039   1 / 107836 1 / 61270 2 / 74039 0 / 27691 1 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 4 / 11462 9 / 89988 1 / 94887   4 / 11462 9 / 89988 1 / 94887 0 / 179472
pancreas   7 / 74930     0 / 7237 7 / 74930 0 / 85728 0 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid   5 / 20557 -- -- 0 / 24 5 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 60 / 241088 7 / 39531 7 / 207348 -- 60 / 241088 7 / 39531 7 / 207348 --
pooled tissue 26 / 276455   -- -- 26 / 276455 0 / 0 -- --
prostate 7 / 79993 13 / 107080 1 / 266949   7 / 79993 13 / 107080 1 / 266949 0 / 491794
retina 2 / 29438 -- 2 / 820326   2 / 29438 -- 2 / 820326 0 / 88490
salivary gland 1 / 2490 1 / 10368 -- -- 1 / 2490 1 / 10368 -- --
skin 4 / 73633 8 / 125377 926 / 26905847 813 / 34522313 4 / 73633 8 / 125377 926 / 26905847 813 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 5 / 52939   -- -- 5 / 52939 0 / 5 -- --
stem cell -- -- 49 / 6230144 -- -- -- 49 / 6230144 --
stomach 2 / 26641 5 / 65644 1 / 124767 1 / 448716 2 / 26641 5 / 65644 1 / 124767 1 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 15 / 143630 5 / 100058 -- 74 / 12372003 15 / 143630 5 / 100058 -- 74 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid       2 / 124664 0 / 11737 0 / 32606 0 / 115938 2 / 124664
uncharacterized tissue 23 / 207932 58 / 479819     23 / 207932 58 / 479819 0 / 21833 0 / 51729
uterus 5 / 38063 4 / 133582 55 / 10193077 -- 5 / 38063 4 / 133582 55 / 10193077 --
vascular   -- 268 / 13135050 -- 0 / 46250 -- 268 / 13135050 --
white blood cells -- -- 8 / 846268 -- -- -- 8 / 846268 --
whole body -- -- -- -- -- -- -- --