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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.534497Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 47 / 3316537 35 / 2498449 75524 / 114162531 15671 / 109592465 47 / 3316537 35 / 2498449 75524 / 114162531 15671 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone     --   0 / 16077 0 / 57865 -- 0 / 83577
bone marrow     7 / 5047110 30 / 4978364 0 / 14774 0 / 29891 7 / 5047110 30 / 4978364
brain 4 / 506301 5 / 200215 9 / 729526 77 / 4997811 4 / 506301 5 / 200215 9 / 729526 77 / 4997811
cartilage     -- 2 / 778035 0 / 15965 0 / 37226 -- 2 / 778035
cerebellum     4 / 90885 21 / 1495938 0 / 90353 0 / 0 4 / 90885 21 / 1495938
cerebrum     -- -- 0 / 198932 0 / 3422 -- --
cervix   6 / 44577 -- -- 0 / 3888 6 / 44577 -- --
colon   3 / 151167 1 / 98089 15 / 643586 0 / 26551 3 / 151167 1 / 98089 15 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 1 / 246043   -- -- 1 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye       125 / 12434232 0 / 128826 0 / 46440 0 / 85898 125 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart 2 / 76442   7 / 83063 -- 2 / 76442 0 / 1 7 / 83063 --
kidney 9 / 106627 1 / 89898 2 / 155372 2 / 100281 9 / 106627 1 / 89898 2 / 155372 2 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 1 / 107249 2 / 66308 23 / 214987 1 / 96846 1 / 107249 2 / 66308 23 / 214987
lung 2 / 128150 7 / 170663 10 / 159917 12 / 159059 2 / 128150 7 / 170663 10 / 159917 12 / 159059
lymph node     81 / 5278419 765 / 4863489 0 / 62650 0 / 27007 81 / 5278419 765 / 4863489
lymphoreticular 1 / 17836   -- -- 1 / 17836 0 / 44303 -- --
mammary gland     653 / 43166038 1545 / 30312656 0 / 46553 0 / 104307 653 / 43166038 1545 / 30312656
muscle 6 / 74039   7 / 107836 1 / 61270 6 / 74039 0 / 27691 7 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   3 / 89988 1 / 94887 8 / 179472 0 / 11462 3 / 89988 1 / 94887 8 / 179472
pancreas       3 / 189999 0 / 7237 0 / 74930 0 / 85728 3 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 5 / 241088   4 / 207348 -- 5 / 241088 0 / 39531 4 / 207348 --
pooled tissue 10 / 276455   -- -- 10 / 276455 0 / 0 -- --
prostate 3 / 79993   254 / 266949 12 / 491794 3 / 79993 0 / 107080 254 / 266949 12 / 491794
retina   -- 16 / 820326 1 / 88490 0 / 29438 -- 16 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 3 / 73633   73791 / 26905847 12208 / 34522313 3 / 73633 0 / 125377 73791 / 26905847 12208 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 109 / 6230144 -- -- -- 109 / 6230144 --
stomach   1 / 65644 2 / 124767 11 / 448716 0 / 26641 1 / 65644 2 / 124767 11 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis     -- 788 / 12372003 0 / 143630 0 / 100058 -- 788 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     8 / 115938 18 / 124664 0 / 11737 0 / 32606 8 / 115938 18 / 124664
uncharacterized tissue   6 / 479819   4 / 51729 0 / 207932 6 / 479819 0 / 21833 4 / 51729
uterus   1 / 133582 153 / 10193077 -- 0 / 38063 1 / 133582 153 / 10193077 --
vascular   -- 366 / 13135050 -- 0 / 46250 -- 366 / 13135050 --
white blood cells -- -- 37 / 846268 -- -- -- 37 / 846268 --
whole body -- -- -- -- -- -- -- --