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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.534312Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 200 / 3316537 205 / 2498449 1321 / 114162531 1971 / 109592465 200 / 3316537 205 / 2498449 1321 / 114162531 1971 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   9 / 57865 --   0 / 16077 9 / 57865 -- 0 / 83577
bone marrow   3 / 29891 6 / 5047110 16 / 4978364 0 / 14774 3 / 29891 6 / 5047110 16 / 4978364
brain 43 / 506301 20 / 200215 13 / 729526 92 / 4997811 43 / 506301 20 / 200215 13 / 729526 92 / 4997811
cartilage 2 / 15965 4 / 37226 -- 3 / 778035 2 / 15965 4 / 37226 -- 3 / 778035
cerebellum 10 / 90353   2 / 90885 36 / 1495938 10 / 90353 0 / 0 2 / 90885 36 / 1495938
cerebrum 11 / 198932   -- -- 11 / 198932 0 / 3422 -- --
cervix   9 / 44577 -- -- 0 / 3888 9 / 44577 -- --
colon 2 / 26551 10 / 151167 2 / 98089 8 / 643586 2 / 26551 10 / 151167 2 / 98089 8 / 643586
ear 3 / 16130 -- -- -- 3 / 16130 -- -- --
embryonic tissue 18 / 246043   -- -- 18 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye 2 / 128826 2 / 46440   421 / 12434232 2 / 128826 2 / 46440 0 / 85898 421 / 12434232
gastrointestinal tract 5 / 28803 2 / 12721 1 / 45908 -- 5 / 28803 2 / 12721 1 / 45908 --
heart 3 / 76442   75 / 83063 -- 3 / 76442 0 / 1 75 / 83063 --
kidney 9 / 106627 9 / 89898 4 / 155372 3 / 100281 9 / 106627 9 / 89898 4 / 155372 3 / 100281
limb -- -- -- -- -- -- -- --
liver   5 / 107249 1 / 66308 2 / 214987 0 / 96846 5 / 107249 1 / 66308 2 / 214987
lung 8 / 128150 7 / 170663 2 / 159917 3 / 159059 8 / 128150 7 / 170663 2 / 159917 3 / 159059
lymph node 2 / 62650   94 / 5278419 55 / 4863489 2 / 62650 0 / 27007 94 / 5278419 55 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland 1 / 46553 8 / 104307 24 / 43166038 832 / 30312656 1 / 46553 8 / 104307 24 / 43166038 832 / 30312656
muscle 1 / 74039 2 / 27691 157 / 107836   1 / 74039 2 / 27691 157 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 13 / 89988   5 / 179472 1 / 11462 13 / 89988 0 / 94887 5 / 179472
pancreas   3 / 74930 2 / 85728   0 / 7237 3 / 74930 2 / 85728 0 / 189999
pancreatic islet 7 / 96524   -- -- 7 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 24 / 241088   1 / 207348 -- 24 / 241088 0 / 39531 1 / 207348 --
pooled tissue 13 / 276455   -- -- 13 / 276455 0 / 0 -- --
prostate 3 / 79993 6 / 107080 5 / 266949 14 / 491794 3 / 79993 6 / 107080 5 / 266949 14 / 491794
retina 1 / 29438 -- 10 / 820326 1 / 88490 1 / 29438 -- 10 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 4 / 73633 21 / 125377 311 / 26905847 366 / 34522313 4 / 73633 21 / 125377 311 / 26905847 366 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 4 / 52939   -- -- 4 / 52939 0 / 5 -- --
stem cell -- -- 50 / 6230144 -- -- -- 50 / 6230144 --
stomach 1 / 26641 9 / 65644 3 / 124767 5 / 448716 1 / 26641 9 / 65644 3 / 124767 5 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 6 / 143630 11 / 100058 -- 106 / 12372003 6 / 143630 11 / 100058 -- 106 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   5 / 32606 1 / 115938 2 / 124664 0 / 11737 5 / 32606 1 / 115938 2 / 124664
uncharacterized tissue 10 / 207932 38 / 479819   1 / 51729 10 / 207932 38 / 479819 0 / 21833 1 / 51729
uterus 1 / 38063 4 / 133582 63 / 10193077 -- 1 / 38063 4 / 133582 63 / 10193077 --
vascular 2 / 46250 -- 491 / 13135050 -- 2 / 46250 -- 491 / 13135050 --
white blood cells -- -- 3 / 846268 -- -- -- 3 / 846268 --
whole body -- -- -- -- -- -- -- --