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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.534052Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 425 / 3316537 189 / 2498449 35853 / 114162531 8175 / 109592465 425 / 3316537 189 / 2498449 35853 / 114162531 8175 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   3 / 57865 -- 45 / 83577 0 / 16077 3 / 57865 -- 45 / 83577
bone marrow 1 / 14774 1 / 29891 983 / 5047110 327 / 4978364 1 / 14774 1 / 29891 983 / 5047110 327 / 4978364
brain 20 / 506301 11 / 200215 54 / 729526 355 / 4997811 20 / 506301 11 / 200215 54 / 729526 355 / 4997811
cartilage 1 / 15965 10 / 37226 -- 124 / 778035 1 / 15965 10 / 37226 -- 124 / 778035
cerebellum     2 / 90885 7 / 1495938 0 / 90353 0 / 0 2 / 90885 7 / 1495938
cerebrum 4 / 198932   -- -- 4 / 198932 0 / 3422 -- --
cervix   8 / 44577 -- -- 0 / 3888 8 / 44577 -- --
colon 13 / 26551 20 / 151167 55 / 98089 14 / 643586 13 / 26551 20 / 151167 55 / 98089 14 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 7 / 246043   -- -- 7 / 246043 0 / 38 -- --
endocrine 2 / 19564   -- -- 2 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 12 / 128826   2 / 85898 50 / 12434232 12 / 128826 0 / 46440 2 / 85898 50 / 12434232
gastrointestinal tract 6 / 28803     -- 6 / 28803 0 / 12721 0 / 45908 --
heart 2 / 76442   7 / 83063 -- 2 / 76442 0 / 1 7 / 83063 --
kidney 18 / 106627 3 / 89898 5 / 155372 3 / 100281 18 / 106627 3 / 89898 5 / 155372 3 / 100281
limb -- -- -- -- -- -- -- --
liver 12 / 96846 5 / 107249 2 / 66308 8 / 214987 12 / 96846 5 / 107249 2 / 66308 8 / 214987
lung 16 / 128150 14 / 170663 8 / 159917 26 / 159059 16 / 128150 14 / 170663 8 / 159917 26 / 159059
lymph node 4 / 62650 4 / 27007 103 / 5278419 7 / 4863489 4 / 62650 4 / 27007 103 / 5278419 7 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland 8 / 46553 5 / 104307 31394 / 43166038 6175 / 30312656 8 / 46553 5 / 104307 31394 / 43166038 6175 / 30312656
muscle 3 / 74039   6 / 107836 2 / 61270 3 / 74039 0 / 27691 6 / 107836 2 / 61270
nervous 20 / 10333   -- -- 20 / 10333 0 / 8 -- --
ovary   12 / 89988 1 / 94887 22 / 179472 0 / 11462 12 / 89988 1 / 94887 22 / 179472
pancreas   15 / 74930 5 / 85728 46 / 189999 0 / 7237 15 / 74930 5 / 85728 46 / 189999
pancreatic islet 55 / 96524   -- -- 55 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 11 / 14891   -- -- 11 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 72 / 241088   3 / 207348 -- 72 / 241088 0 / 39531 3 / 207348 --
pooled tissue 17 / 276455   -- -- 17 / 276455 0 / 0 -- --
prostate 6 / 79993 2 / 107080 32 / 266949 24 / 491794 6 / 79993 2 / 107080 32 / 266949 24 / 491794
retina 3 / 29438 -- 15 / 820326   3 / 29438 -- 15 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 5 / 73633 1 / 125377 620 / 26905847 874 / 34522313 5 / 73633 1 / 125377 620 / 26905847 874 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 41 / 6230144 -- -- -- 41 / 6230144 --
stomach 6 / 26641 20 / 65644 3 / 124767 29 / 448716 6 / 26641 20 / 65644 3 / 124767 29 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 16 / 143630 1 / 100058 -- 22 / 12372003 16 / 143630 1 / 100058 -- 22 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606 23 / 115938 15 / 124664 0 / 11737 1 / 32606 23 / 115938 15 / 124664
uncharacterized tissue 69 / 207932 29 / 479819 1 / 21833   69 / 207932 29 / 479819 1 / 21833 0 / 51729
uterus 9 / 38063 23 / 133582 1510 / 10193077 -- 9 / 38063 23 / 133582 1510 / 10193077 --
vascular 1 / 46250 -- 526 / 13135050 -- 1 / 46250 -- 526 / 13135050 --
white blood cells -- -- 452 / 846268 -- -- -- 452 / 846268 --
whole body -- -- -- -- -- -- -- --