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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.533878Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 177 / 3316537 117 / 2498449 965 / 114162531 366 / 109592465 177 / 3316537 117 / 2498449 965 / 114162531 366 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone     --   0 / 16077 0 / 57865 -- 0 / 83577
bone marrow     10 / 5047110 48 / 4978364 0 / 14774 0 / 29891 10 / 5047110 48 / 4978364
brain 58 / 506301 7 / 200215 10 / 729526 60 / 4997811 58 / 506301 7 / 200215 10 / 729526 60 / 4997811
cartilage     -- 4 / 778035 0 / 15965 0 / 37226 -- 4 / 778035
cerebellum 10 / 90353   2 / 90885 10 / 1495938 10 / 90353 0 / 0 2 / 90885 10 / 1495938
cerebrum 15 / 198932   -- -- 15 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon 1 / 26551 7 / 151167   1 / 643586 1 / 26551 7 / 151167 0 / 98089 1 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 6 / 246043   -- -- 6 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 5 / 128826 2 / 46440 1 / 85898 42 / 12434232 5 / 128826 2 / 46440 1 / 85898 42 / 12434232
gastrointestinal tract     1 / 45908 -- 0 / 28803 0 / 12721 1 / 45908 --
heart 1 / 76442     -- 1 / 76442 0 / 1 0 / 83063 --
kidney 9 / 106627 4 / 89898 2 / 155372   9 / 106627 4 / 89898 2 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 3 / 107249     1 / 96846 3 / 107249 0 / 66308 0 / 214987
lung 7 / 128150 14 / 170663   1 / 159059 7 / 128150 14 / 170663 0 / 159917 1 / 159059
lymph node 1 / 62650 1 / 27007 8 / 5278419   1 / 62650 1 / 27007 8 / 5278419 0 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland   4 / 104307 699 / 43166038 98 / 30312656 0 / 46553 4 / 104307 699 / 43166038 98 / 30312656
muscle 1 / 74039       1 / 74039 0 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary         0 / 11462 0 / 89988 0 / 94887 0 / 179472
pancreas   6 / 74930 2 / 85728 1 / 189999 0 / 7237 6 / 74930 2 / 85728 1 / 189999
pancreatic islet 5 / 96524   -- -- 5 / 96524 0 / 30072 -- --
parathyroid   6 / 20557 -- -- 0 / 24 6 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 7 / 241088   1 / 207348 -- 7 / 241088 0 / 39531 1 / 207348 --
pooled tissue 12 / 276455   -- -- 12 / 276455 0 / 0 -- --
prostate 5 / 79993 4 / 107080 1 / 266949 5 / 491794 5 / 79993 4 / 107080 1 / 266949 5 / 491794
retina 1 / 29438 -- 4 / 820326   1 / 29438 -- 4 / 820326 0 / 88490
salivary gland 1 / 2490   -- -- 1 / 2490 0 / 10368 -- --
skin 5 / 73633   46 / 26905847 43 / 34522313 5 / 73633 0 / 125377 46 / 26905847 43 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 38 / 6230144 -- -- -- 38 / 6230144 --
stomach   3 / 65644 1 / 124767 2 / 448716 0 / 26641 3 / 65644 1 / 124767 2 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 19 / 143630 9 / 100058 -- 51 / 12372003 19 / 143630 9 / 100058 -- 51 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   2 / 32606     0 / 11737 2 / 32606 0 / 115938 0 / 124664
uncharacterized tissue 3 / 207932 39 / 479819     3 / 207932 39 / 479819 0 / 21833 0 / 51729
uterus 3 / 38063 5 / 133582 119 / 10193077 -- 3 / 38063 5 / 133582 119 / 10193077 --
vascular   -- 15 / 13135050 -- 0 / 46250 -- 15 / 13135050 --
white blood cells -- -- 5 / 846268 -- -- -- 5 / 846268 --
whole body -- -- -- -- -- -- -- --