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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.533262Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 100 / 3316537 131 / 2498449 4438 / 114162531 601 / 109592465 100 / 3316537 131 / 2498449 4438 / 114162531 601 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   2 / 57865 -- 3 / 83577 0 / 16077 2 / 57865 -- 3 / 83577
bone marrow   1 / 29891 10 / 5047110   0 / 14774 1 / 29891 10 / 5047110 0 / 4978364
brain 13 / 506301 5 / 200215 31 / 729526 150 / 4997811 13 / 506301 5 / 200215 31 / 729526 150 / 4997811
cartilage   1 / 37226 -- 16 / 778035 0 / 15965 1 / 37226 -- 16 / 778035
cerebellum     2 / 90885 50 / 1495938 0 / 90353 0 / 0 2 / 90885 50 / 1495938
cerebrum 3 / 198932   -- -- 3 / 198932 0 / 3422 -- --
cervix   3 / 44577 -- -- 0 / 3888 3 / 44577 -- --
colon 1 / 26551 11 / 151167   28 / 643586 1 / 26551 11 / 151167 0 / 98089 28 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 15 / 246043   -- -- 15 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 5 / 128826 1 / 46440 5 / 85898 49 / 12434232 5 / 128826 1 / 46440 5 / 85898 49 / 12434232
gastrointestinal tract   1 / 12721 2 / 45908 -- 0 / 28803 1 / 12721 2 / 45908 --
heart     4 / 83063 -- 0 / 76442 0 / 1 4 / 83063 --
kidney 2 / 106627   4 / 155372 2 / 100281 2 / 106627 0 / 89898 4 / 155372 2 / 100281
limb -- -- -- -- -- -- -- --
liver   3 / 107249 2 / 66308 5 / 214987 0 / 96846 3 / 107249 2 / 66308 5 / 214987
lung 4 / 128150 14 / 170663 3 / 159917 2 / 159059 4 / 128150 14 / 170663 3 / 159917 2 / 159059
lymph node 1 / 62650   50 / 5278419 1 / 4863489 1 / 62650 0 / 27007 50 / 5278419 1 / 4863489
lymphoreticular 1 / 17836 30 / 44303 -- -- 1 / 17836 30 / 44303 -- --
mammary gland 1 / 46553 2 / 104307 3968 / 43166038 116 / 30312656 1 / 46553 2 / 104307 3968 / 43166038 116 / 30312656
muscle   1 / 27691 3 / 107836 2 / 61270 0 / 74039 1 / 27691 3 / 107836 2 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   2 / 89988 3 / 94887 2 / 179472 0 / 11462 2 / 89988 3 / 94887 2 / 179472
pancreas   1 / 74930 8 / 85728 5 / 189999 0 / 7237 1 / 74930 8 / 85728 5 / 189999
pancreatic islet 5 / 96524   -- -- 5 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 2 / 14891   -- -- 2 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 12 / 241088 3 / 39531 7 / 207348 -- 12 / 241088 3 / 39531 7 / 207348 --
pooled tissue 12 / 276455   -- -- 12 / 276455 0 / 0 -- --
prostate 1 / 79993 4 / 107080 4 / 266949 20 / 491794 1 / 79993 4 / 107080 4 / 266949 20 / 491794
retina 4 / 29438 -- 29 / 820326 5 / 88490 4 / 29438 -- 29 / 820326 5 / 88490
salivary gland   2 / 10368 -- -- 0 / 2490 2 / 10368 -- --
skin 1 / 73633 10 / 125377 119 / 26905847 72 / 34522313 1 / 73633 10 / 125377 119 / 26905847 72 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 47 / 6230144 -- -- -- 47 / 6230144 --
stomach   4 / 65644 6 / 124767 11 / 448716 0 / 26641 4 / 65644 6 / 124767 11 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 2 / 143630   -- 58 / 12372003 2 / 143630 0 / 100058 -- 58 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid     4 / 115938   0 / 11737 0 / 32606 4 / 115938 0 / 124664
uncharacterized tissue 14 / 207932 21 / 479819   4 / 51729 14 / 207932 21 / 479819 0 / 21833 4 / 51729
uterus   8 / 133582 73 / 10193077 -- 0 / 38063 8 / 133582 73 / 10193077 --
vascular   -- 21 / 13135050 -- 0 / 46250 -- 21 / 13135050 --
white blood cells -- -- 33 / 846268 -- -- -- 33 / 846268 --
whole body -- -- -- -- -- -- -- --