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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.530730Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 134 / 3316537 127 / 2498449 5904 / 114162531 962 / 109592465 134 / 3316537 127 / 2498449 5904 / 114162531 962 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   1 / 57865 -- 3 / 83577 0 / 16077 1 / 57865 -- 3 / 83577
bone marrow     1 / 5047110 2 / 4978364 0 / 14774 0 / 29891 1 / 5047110 2 / 4978364
brain 8 / 506301 11 / 200215 11 / 729526 32 / 4997811 8 / 506301 11 / 200215 11 / 729526 32 / 4997811
cartilage   2 / 37226 -- 10 / 778035 0 / 15965 2 / 37226 -- 10 / 778035
cerebellum     1 / 90885   0 / 90353 0 / 0 1 / 90885 0 / 1495938
cerebrum 3 / 198932 1 / 3422 -- -- 3 / 198932 1 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon 2 / 26551 13 / 151167 2 / 98089 6 / 643586 2 / 26551 13 / 151167 2 / 98089 6 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 20 / 246043   -- -- 20 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 9 / 128826   1 / 85898 38 / 12434232 9 / 128826 0 / 46440 1 / 85898 38 / 12434232
gastrointestinal tract 1 / 28803 1 / 12721   -- 1 / 28803 1 / 12721 0 / 45908 --
heart 2 / 76442   2 / 83063 -- 2 / 76442 0 / 1 2 / 83063 --
kidney 3 / 106627 9 / 89898 2 / 155372 5 / 100281 3 / 106627 9 / 89898 2 / 155372 5 / 100281
limb -- -- -- -- -- -- -- --
liver 7 / 96846 3 / 107249   1 / 214987 7 / 96846 3 / 107249 0 / 66308 1 / 214987
lung 8 / 128150 6 / 170663 2 / 159917 3 / 159059 8 / 128150 6 / 170663 2 / 159917 3 / 159059
lymph node     7 / 5278419   0 / 62650 0 / 27007 7 / 5278419 0 / 4863489
lymphoreticular   2 / 44303 -- -- 0 / 17836 2 / 44303 -- --
mammary gland 4 / 46553 13 / 104307 4911 / 43166038 344 / 30312656 4 / 46553 13 / 104307 4911 / 43166038 344 / 30312656
muscle 2 / 74039 5 / 27691     2 / 74039 5 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   4 / 89988 2 / 94887 2 / 179472 0 / 11462 4 / 89988 2 / 94887 2 / 179472
pancreas   5 / 74930 1 / 85728 5 / 189999 0 / 7237 5 / 74930 1 / 85728 5 / 189999
pancreatic islet 5 / 96524   -- -- 5 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 3 / 14891   -- -- 3 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 25 / 241088 2 / 39531 1 / 207348 -- 25 / 241088 2 / 39531 1 / 207348 --
pooled tissue 6 / 276455   -- -- 6 / 276455 0 / 0 -- --
prostate 4 / 79993 10 / 107080 1 / 266949 13 / 491794 4 / 79993 10 / 107080 1 / 266949 13 / 491794
retina   --     0 / 29438 -- 0 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 7 / 73633 3 / 125377 422 / 26905847 349 / 34522313 7 / 73633 3 / 125377 422 / 26905847 349 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 5 / 52939   -- -- 5 / 52939 0 / 5 -- --
stem cell -- -- 47 / 6230144 -- -- -- 47 / 6230144 --
stomach 1 / 26641 3 / 65644   1 / 448716 1 / 26641 3 / 65644 0 / 124767 1 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 3 / 143630 1 / 100058 -- 148 / 12372003 3 / 143630 1 / 100058 -- 148 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 1 / 11737 6 / 32606     1 / 11737 6 / 32606 0 / 115938 0 / 124664
uncharacterized tissue 3 / 207932 13 / 479819     3 / 207932 13 / 479819 0 / 21833 0 / 51729
uterus   11 / 133582 279 / 10193077 -- 0 / 38063 11 / 133582 279 / 10193077 --
vascular 1 / 46250 -- 207 / 13135050 -- 1 / 46250 -- 207 / 13135050 --
white blood cells -- -- 4 / 846268 -- -- -- 4 / 846268 --
whole body -- -- -- -- -- -- -- --