Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Tissues
  • Tools
  • SNPs by tissue
  • CGAP Data
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.529353Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 228 / 3316537 105 / 2498449 1110 / 114162531 1858 / 109592465 228 / 3316537 105 / 2498449 1110 / 114162531 1858 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 2 / 57865 -- 1 / 83577 1 / 16077 2 / 57865 -- 1 / 83577
bone marrow 1 / 14774 10 / 29891 35 / 5047110 55 / 4978364 1 / 14774 10 / 29891 35 / 5047110 55 / 4978364
brain 36 / 506301 14 / 200215 16 / 729526 386 / 4997811 36 / 506301 14 / 200215 16 / 729526 386 / 4997811
cartilage   2 / 37226 -- 2 / 778035 0 / 15965 2 / 37226 -- 2 / 778035
cerebellum 10 / 90353   2 / 90885 12 / 1495938 10 / 90353 0 / 0 2 / 90885 12 / 1495938
cerebrum 39 / 198932   -- -- 39 / 198932 0 / 3422 -- --
cervix   1 / 44577 -- -- 0 / 3888 1 / 44577 -- --
colon   24 / 151167 3 / 98089 8 / 643586 0 / 26551 24 / 151167 3 / 98089 8 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 1 / 246043   -- -- 1 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 17 / 128826   2 / 85898 9 / 12434232 17 / 128826 0 / 46440 2 / 85898 9 / 12434232
gastrointestinal tract     2 / 45908 -- 0 / 28803 0 / 12721 2 / 45908 --
heart 4 / 76442   5 / 83063 -- 4 / 76442 0 / 1 5 / 83063 --
kidney 7 / 106627 1 / 89898 3 / 155372 16 / 100281 7 / 106627 1 / 89898 3 / 155372 16 / 100281
limb -- -- -- -- -- -- -- --
liver     3 / 66308 6 / 214987 0 / 96846 0 / 107249 3 / 66308 6 / 214987
lung 3 / 128150 3 / 170663 3 / 159917 10 / 159059 3 / 128150 3 / 170663 3 / 159917 10 / 159059
lymph node 5 / 62650 2 / 27007 92 / 5278419 5 / 4863489 5 / 62650 2 / 27007 92 / 5278419 5 / 4863489
lymphoreticular 2 / 17836   -- -- 2 / 17836 0 / 44303 -- --
mammary gland 1 / 46553 4 / 104307 97 / 43166038 222 / 30312656 1 / 46553 4 / 104307 97 / 43166038 222 / 30312656
muscle 3 / 74039   1 / 107836   3 / 74039 0 / 27691 1 / 107836 0 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary   2 / 89988 1 / 94887   0 / 11462 2 / 89988 1 / 94887 0 / 179472
pancreas   1 / 74930 5 / 85728 3 / 189999 0 / 7237 1 / 74930 5 / 85728 3 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 3 / 14891   -- -- 3 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 48 / 241088 2 / 39531 74 / 207348 -- 48 / 241088 2 / 39531 74 / 207348 --
pooled tissue 9 / 276455   -- -- 9 / 276455 0 / 0 -- --
prostate 9 / 79993 1 / 107080 3 / 266949 15 / 491794 9 / 79993 1 / 107080 3 / 266949 15 / 491794
retina   -- 13 / 820326   0 / 29438 -- 13 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 3 / 73633 7 / 125377 236 / 26905847 1081 / 34522313 3 / 73633 7 / 125377 236 / 26905847 1081 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- --   -- -- -- 0 / 6230144 --
stomach 2 / 26641 1 / 65644 5 / 124767 8 / 448716 2 / 26641 1 / 65644 5 / 124767 8 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 13 / 143630   -- 14 / 12372003 13 / 143630 0 / 100058 -- 14 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     6 / 115938 2 / 124664 0 / 11737 0 / 32606 6 / 115938 2 / 124664
uncharacterized tissue 10 / 207932 23 / 479819   3 / 51729 10 / 207932 23 / 479819 0 / 21833 3 / 51729
uterus   4 / 133582 464 / 10193077 -- 0 / 38063 4 / 133582 464 / 10193077 --
vascular   -- 22 / 13135050 -- 0 / 46250 -- 22 / 13135050 --
white blood cells -- -- 17 / 846268 -- -- -- 17 / 846268 --
whole body -- -- -- -- -- -- -- --